Gene

pnrc1

ID
ZDB-GENE-040724-189
Name
proline-rich nuclear receptor coactivator 1
Symbol
pnrc1 Nomenclature History
Previous Names
  • si:dkey-77b17.2
Type
protein_coding_gene
Location
Chr: 20 Mapping Details/Browsers
Description
Predicted to be involved in nuclear-transcribed mRNA catabolic process, nonsense-mediated decay. Predicted to be active in P-body and nucleus. Orthologous to human PNRC1 (proline rich nuclear receptor coactivator 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
t26214unknownUnknownUnknownENU
1 - 1 of 1
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Sequence Targeting Reagents
Targeting Reagent Created Alleles Citations
MO1-pnrc1N/AO'Meara et al., 2021
MO2-pnrc1N/AO'Meara et al., 2021
1 - 2 of 2
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Human Disease
Associated With pnrc1 Human Ortholog
No data available
Associated With pnrc1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Family IPR026780 Proline-rich nuclear receptor coactivator 1/2
1 - 1 of 1
Domain Details Per Protein
Protein Additional Resources Length Proline-rich nuclear receptor coactivator 1/2
UniProtKB:Q5TZ15 InterPro 197
1 - 1 of 1
Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 20
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA pnrc1-201 (1)
Ensembl
Ensembl 808 nt
ZFIN BLAST
1 - 1 of 1
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACDKEY-77B17
1 - 1 of 1
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Sequences
Type Accession # Sequence Length (nt/aa) Analysis
RNARefSeq:NM_001083079 (1)808 nt
ZFIN BLASTNCBI BLASTEnsemblUCSC BLAT
GenomicGenBank:BX537249 (1)92426 nt
MegaBLASTEnsembl
PolypeptideUniProtKB:Q5TZ15 (1)197 aa
ZFIN BLASTSIB BLASTEnsembl Protein Blast
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Species Symbol Chromosome Accession # Evidence
HumanPNRC16
Conserved genome location (synteny) (1)
Amino acid sequence comparison (2)
MousePnrc14
Conserved genome location (synteny) (1)
Amino acid sequence comparison (1)
Citations
TSV
1 - 2 of 2
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