Gene

ppfibp2b

ID

ZDB-GENE-040718-54

Name

PPFIA binding protein 2b

Symbol

ppfibp2b Nomenclature History

Previous Names

zgc:92104

Type

protein_coding_gene

Location

Chr: 25 Mapping Details/Browsers

Description

Predicted to be involved in neuromuscular junction development. Predicted to localize to presynaptic active zone. Orthologous to human PPFIBP2 (PPFIA binding protein 2).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

MGC:92104 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With ppfibp2b Human Ortholog

No data available

Associated With ppfibp2b Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR001660	Sterile alpha motif domain
Domain	IPR003112	Olfactomedin-like domain
Domain	IPR037617	Liprin-beta, SAM domain repeat 1
Domain	IPR037618	Liprin-beta, SAM domain repeat 2
Domain	IPR037619	Liprin-beta, SAM domain repeat 3
Family	IPR029515	LAR-interacting protein, Liprin
Family	IPR050605	Olfactomedin-like domain-containing protein
Homologous_superfamily	IPR013761	Sterile alpha motif/pointed domain superfamily

Domain Details Per Protein

Protein	Length	LAR-interacting protein, Liprin	Liprin-beta, SAM domain repeat 1	Liprin-beta, SAM domain repeat 2	Liprin-beta, SAM domain repeat 3	Olfactomedin-like domain	Olfactomedin-like domain-containing protein	Sterile alpha motif domain	Sterile alpha motif/pointed domain superfamily
UniProtKB:A2CET3 InterPro	243
UniProtKB:A0A2R8QLQ1 InterPro	390
UniProtKB:F1QB48 InterPro	979

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	ppfibp2b-201 (1) Ensembl	Ensembl	5,505 nt	Select Tool ZFIN BLAST
mRNA	ppfibp2b-202 (1) Ensembl	Ensembl	1,370 nt	Select Tool ZFIN BLAST
mRNA	ppfibp2b-203 (1) Ensembl	Ensembl	597 nt	Select Tool ZFIN BLAST
mRNA	ppfibp2b-204 (1) Ensembl	Ensembl	2,466 nt	Select Tool ZFIN BLAST
mRNA	ppfibp2b-205 (1) Ensembl	Ensembl	5,395 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations