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ZIRC
ZFIN ID: ZDB-GENE-040704-56
Gene Name: TatD DNase domain containing 1
Gene Symbol: tatdn1    Nomenclature History

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Previous Name: zgc:92362

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 19 Mapping Details/Browsers
Description: Exhibits deoxyribonuclease I activity. Involved in DNA replication and retina layer formation. Predicted to localize to the nucleus. Is expressed in alar plate midbrain region; brain; optic vesicle; and retina. Orthologous to human TATDN1 (TatD DNase domain containing 1).
Genome Resources: Alliance (1),  Gene:100151626 (1),  Ensembl(GRCz11):ENSDARG00000036924 (2)
GENE EXPRESSION
All Expression Data: 7 figures from 2 publications
Directly Submitted Expression Data: 6 figures (16 images) from Thisse et al., 2004 [MGC:92362]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Long-pec (48.0h-60.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Sequence Targeting Reagents
Targeting Reagent Created Alleles Publications
MO1-tatdn1 N/A 1
MO2-tatdn1 N/A 1
DISEASE ASSOCIATED WITH tatdn1 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH tatdn1 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process DNA replication (more)
Cellular Component nucleus (more)
Molecular Function deoxyribonuclease I activity (more)
GO Terms (all 10)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001130 (1)
  • InterPro:IPR032466 (1)
  • Pfam:PF01026 (1)
  • EC:3.1.21.- (1)
  • TRANSCRIPTS No data available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM tatdn1 No data available
    MARKER RELATIONSHIPS
    tatdn1 Encodes: [cDNA] MGC:92362 (1) (order this), MGC:191238 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001002213 (1)
    Genomic GenBank:CABZ01067086 (1) 32158 bp
    Select Tool
    Polypeptide UniProtKB:B2GNR2 (1) 298 aa
    Sequence Clusters UniGene:85256 (1)
    Sequence Information (all 18)
    ORTHOLOGY for tatdn1 ( Chr: 19 )
    CITATIONS (17)