ZFIN is now using GRCz12tu for Genomic Data
Gene
rbm14b
- ID
- ZDB-GENE-040426-2455
- Name
- RNA binding motif protein 14b
- Symbol
- rbm14b Nomenclature History
- Previous Names
-
- zgc:85696
- Type
- protein_coding_gene
- Location
- Chr: 7 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable RNA binding activity and zinc ion binding activity. Acts upstream of with a negative effect on BMP signaling pathway. Predicted to be active in nucleolus. Orthologous to several human genes including RBM14 (RNA binding motif protein 14).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Xiao et al., 2019
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR000504 | RNA recognition motif domain |
| Domain | IPR001878 | Zinc finger, CCHC-type |
| Domain | IPR003954 | RNA recognition motif domain, eukaryotes |
| Domain | IPR034506 | RBM14, RNA recognition motif 1 |
| Family | IPR050502 | Eukaryotic RNA-binding |
| Family | IPR051945 | RRM MRD1 RNA Processing and Ribosome Biogenesis |
| Homologous_superfamily | IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| Homologous_superfamily | IPR035979 | RNA-binding domain superfamily |
| Homologous_superfamily | IPR036875 | Zinc finger, CCHC-type superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | Eukaryotic RNA-binding | Nucleotide-binding alpha-beta plait domain superfamily | RBM14, RNA recognition motif 1 | RNA-binding domain superfamily | RNA recognition motif domain | RNA recognition motif domain, eukaryotes | RRM MRD1 RNA Processing and Ribosome Biogenesis | Zinc finger, CCHC-type | Zinc finger, CCHC-type superfamily |
|---|---|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:F1QG19 | InterPro | ||||||||||
| UniProtKB:A0A8M9Q1B8 | InterPro | 560 | |||||||||
| UniProtKB:A0A0R4IJ04 | InterPro | 556 | |||||||||
| UniProtKB:A0A8M9Q7N4 | InterPro | 560 | |||||||||
| UniProtKB:Q6NV05 | InterPro | 556 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
rbm14b-201
(1)
|
Ensembl | 2,257 nt | ||
| mRNA |
rbm14b-202
(1)
|
Ensembl | 2,257 nt | ||
| mRNA |
rbm14b-203
(1)
|
Ensembl | 9,621 nt | ||
| mRNA |
rbm14b-204
(1)
|
Ensembl | 3,016 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers