Gene

rbm14b

ID

ZDB-GENE-040426-2455

Name

RNA binding motif protein 14b

Symbol

rbm14b Nomenclature History

Previous Names

zgc:85696

Type

protein_coding_gene

Location

Chr: 7 Mapping Details/Browsers

Description

Predicted to enable RNA binding activity and zinc ion binding activity. Acts upstream of with a negative effect on BMP signaling pathway. Predicted to be located in nucleus. Predicted to be part of spliceosomal complex. Predicted to be active in nucleolus. Orthologous to several human genes including RBM14 (RNA binding motif protein 14).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Xiao et al., 2019

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With rbm14b Human Ortholog

No data available

Associated With rbm14b Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR000504	RNA recognition motif domain
Domain	IPR001878	Zinc finger, CCHC-type
Domain	IPR034506	RBM14, RNA recognition motif 1
Family	IPR050502	Eukaryotic RNA-binding
Homologous_superfamily	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily
Homologous_superfamily	IPR035979	RNA-binding domain superfamily
Homologous_superfamily	IPR036875	Zinc finger, CCHC-type superfamily

Domain Details Per Protein

Protein	Length	Eukaryotic RNA-binding	Nucleotide-binding alpha-beta plait domain superfamily	RBM14, RNA recognition motif 1	RNA-binding domain superfamily	RNA recognition motif domain	Zinc finger, CCHC-type	Zinc finger, CCHC-type superfamily
UniProtKB:F1QG19 InterPro
UniProtKB:A0A8M9Q1B8 InterPro	560
UniProtKB:A0A0R4IJ04 InterPro	556
UniProtKB:A0A8M9Q7N4 InterPro	560
UniProtKB:Q6NV05 InterPro	556

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	rbm14b-201 (1) Ensembl	Ensembl	2,257 nt	Select Tool ZFIN BLAST
mRNA	rbm14b-202 (1) Ensembl	Ensembl	2,257 nt	Select Tool ZFIN BLAST
mRNA	rbm14b-203 (1) Ensembl	Ensembl	9,621 nt	Select Tool ZFIN BLAST
mRNA	rbm14b-204 (1) Ensembl	Ensembl	3,016 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations