header logo image header logo text
Downloads Login
Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-040426-2313
Gene Name: sp9 transcription factor
Gene Symbol: sp9    Nomenclature History

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Name: zgc:85876

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 9 Mapping Details/Browsers
Description: Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific. Involved in embryonic limb morphogenesis; embryonic pectoral fin morphogenesis; and positive regulation of fibroblast growth factor receptor signaling pathway. Predicted to localize to the nucleus. Is expressed in several structures, including median fin fold; neural tube; pectoral fin bud; presumptive median fin fold; and tail bud. Orthologous to human SP9 (Sp9 transcription factor).
Genome Resources: Alliance (1),  Gene:405896 (1),  Ensembl(GRCz11):ENSDARG00000099374 (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa41338 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH sp9 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH sp9 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process embryonic limb morphogenesis (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 9)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR013087 (1)
  • InterPro:IPR036236 (1)
  • PROSITE:PS00028 (1)
  • PROSITE:PS50157 (1)
  • Pfam:PF00096 (1)
  • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA sp9-202 (1)    Ensembl 1533
    ncRNA sp9-002 (1)    Ensembl 2019
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM sp9 No data available
    MARKER RELATIONSHIPS
    sp9 Contained in: [BAC] CH73-32J2 (1) (order this)
    sp9 Encodes: [cDNA] MGC:85876 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_212960 (1) 2459 bp
    Genomic GenBank:CU468954 (1) 63605 bp
    Select Tool
    Polypeptide UniProtKB:Q6NW96 (1) 439 aa
    Sequence Clusters UniGene:159361 (1)
    Sequence Information (all 19)
    ORTHOLOGY for sp9 ( Chr: 9 )
    CITATIONS (25)