ZFIN ID: ZDB-GENE-040426-1808
Gene Name: transmembrane protein 88 a
Gene Symbol: tmem88a
Sequence Ontology ID : SO:0000704

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Previous Name: zgc:77242

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(Including Attributions)
Location: Chr: 10 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have PDZ domain binding activity; involved in myeloid cell differentiation, negative regulation of canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment, and  ...
GENE EXPRESSION
All Expression Data: 14 figures from 6 publications
Directly Submitted Expression Data: 6 figures (19 images) from Thisse et al., 2004 [MGC:77242]
Wild-type Stages, Structures: Gastrula:Bud (10.0h-10.33h) to Hatching:Long-pec (48.0h-60.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
fci400 Small Deletion Exon 2 Frameshift, Premature Stop TALEN
Targeting reagents:
PHENOTYPE
Data: 11 figures from 4 publications
Observed in:
DISEASE ASSOCIATED WITH tmem88a HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH tmem88a VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process myeloid cell differentiation (more)
Cellular Component integral component of membrane (more)
Molecular Function molecular_function (more)
GO Terms (all 6)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR033355 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA tmem88a-201 (1) 1301
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDS
    Addgene
    CONSTRUCTS WITH SEQUENCES FROM tmem88a No data available
    MARKER RELATIONSHIPS
    tmem88aContained in: [BAC] CH211-237L4 (1) (order this)
    tmem88aEncodes: [cDNA] MGC:77242 (1) (order this), MGC:173934 (1) (order this), MGC:173935 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_205670 (1) 1248bp
    Genomic GenBank:AL807389 (1) 143672bp
    Select Tool
    Polypeptide UniProtKB:F1QYI4 (1) 219aa
    Sequence Clusters UniGene:89035 (1)
    Sequence Information (all 19)
    OTHER tmem88a GENE PAGES
  • Alliance (1)
  • Gene:402969 (1)
  • VEGA:OTTDARG00000031020 (1)
  • Ensembl(GRCz11):ENSDARG00000056920 (2)
  • ORTHOLOGY for tmem88a (Chr: 10)
    CITATIONS (27)