Gene

smfn

ID
ZDB-GENE-040426-1709
Name
small fragment nuclease
Symbol
smfn Nomenclature History
Previous Names
  • zgc:73191
Type
protein_coding_gene
Location
Chr: 10 Mapping Details/Browsers
Description
Predicted to have 3'-5'-exoribonuclease activity. Predicted to localize to mitochondrion. Orthologous to human REXO2 (RNA exonuclease 2).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With smfn Human Ortholog
No data available
Associated With smfn Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR013520 Exonuclease, RNase T/DNA polymerase III
Family IPR022894 Oligoribonuclease
Homologous_superfamily IPR012337 Ribonuclease H-like superfamily
Homologous_superfamily IPR036397 Ribonuclease H superfamily
Domain Details Per Protein
Protein Length Exonuclease, RNase T/DNA polymerase III Oligoribonuclease Ribonuclease H-like superfamily Ribonuclease H superfamily
UniProtKB:F1QNX9 259
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA smfn-001_dup (1) 780 nt
mRNA smfn-201 (1) Ensembl 1,248 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations