ZFIN is now using GRCz12tu for Genomic Data
Gene
onecut1
- ID
- ZDB-GENE-040426-1469
- Name
- one cut homeobox 1
- Symbol
- onecut1 Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 18 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Acts upstream of or within intrahepatic bile duct development. Predicted to be active in nucleus. Is expressed in several structures, including digestive system; nervous system; presumptive neural retina; pronephric duct; and trigeminal placode. Orthologous to human ONECUT1 (one cut homeobox 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 16 figures from 5 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- MGC:77450 (26 images)
Wild Type Expression Summary
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | CUT domain | CUT Homeobox Domain-Containing Protein | Homedomain-like superfamily | Homeodomain | Lambda repressor-like, DNA-binding domain superfamily |
|---|---|---|---|---|---|---|---|
| UniProtKB:Q6PHC9 | InterPro | 461 | |||||
| UniProtKB:Q6NYT7 | InterPro | 456 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
onecut1-201
(1)
|
Ensembl | 1,858 nt | ||
| mRNA |
onecut1-202
(1)
|
Ensembl | 1,822 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers