Gene

def6a

ID
ZDB-GENE-040426-1246
Name
DEF6 guanine nucleotide exchange factor a
Symbol
def6a Nomenclature History
Previous Names
  • zgc:63721 (1)
Type
protein_coding_gene
Location
Chr: 8 Mapping Details/Browsers
Description
Involved in cell migration involved in gastrulation and convergent extension involved in gastrulation. Predicted to localize to cytoplasm and nucleus. Is expressed in several structures, including female organism; fin; lateral line; post-vent region; and somite border. Orthologous to human DEF6 (DEF6 guanine nucleotide exchange factor).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
3 figures from 3 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
10 figures from 2 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With def6a Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Immunodeficiency 87 and autoimmunity 619573
Associated With def6a Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001849 Pleckstrin homology domain
Homologous_superfamily IPR011992 EF-hand domain pair
Homologous_superfamily IPR011993 PH-like domain superfamily
Domain Details Per Protein
Protein Length EF-hand domain pair PH-like domain superfamily Pleckstrin homology domain
UniProtKB:Q7SYB5 612
UniProtKB:A0A8M6Z7K3 631
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA def6a-201 (1) Ensembl 2,205 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations