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ZIRC
ZFIN ID: ZDB-GENE-040426-1192
Gene Name: tbl1x receptor 1b
Gene Symbol: tbl1xr1b    Nomenclature History

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Previous Names: tbl1xr1, zgc:63617

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 2 Mapping Details/Browsers
Description: Predicted to have transcription corepressor activity. Predicted to be involved in histone deacetylation and regulation of transcription by RNA polymerase II. Predicted to localize to the histone deacetylase complex. Human ortholog(s) of this gene implicated in autosomal dominant non-syndromic intellectual disability 41. Orthologous to human TBL1XR1 (transducin beta like 1 X-linked receptor 1).
Genome Resources: Alliance (1),  Gene:393581 (1),  Ensembl(GRCz11):ENSDARG00000008966 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:6903261]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la023841Tg Transgenic Insertion Unknown Unknown DNA
la023842Tg Transgenic Insertion Unknown Unknown DNA
sa1795 Point Mutation Unknown Missense ENU
sa7261 Point Mutation Unknown Premature Stop ENU
sa12656 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa32840 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH tbl1xr1b HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    autosomal dominant non-syndromic intellectual disability 41 Alliance Mental retardation, autosomal dominant 41 616944
    Pierpont syndrome 602342
    DISEASE ASSOCIATED WITH tbl1xr1b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process histone deacetylation (more)
    Cellular Component histone deacetylase complex (more)
    Molecular Function transcription corepressor activity (more)
    GO Terms (all 4)
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA tbl1xr1b-201 (1)    Ensembl 5999
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM tbl1xr1b No data available
    MARKER RELATIONSHIPS
    tbl1xr1b Contained in: [BAC] CH211-38M6 (1) (order this)
    tbl1xr1b Encodes: [EST] IMAGE:6903261 (1) (order this)
    [cDNA] MGC:63617 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_200609 (1) 2102 bp
    Genomic GenBank:CT027646 (1) 176141 bp
    Select Tool
    Polypeptide UniProtKB:A5WVU0 (1) 510 aa
    Sequence Clusters UniGene:132934 (1)
    Sequence Information (all 13)
    ORTHOLOGY for tbl1xr1b ( Chr: 2 )
    CITATIONS (19)