Gene

vti1b

ID
ZDB-GENE-040426-1148
Name
vesicle transport through interaction with t-SNAREs 1B
Symbol
vti1b Nomenclature History
Previous Names
  • zgc:63525
Type
protein_coding_gene
Location
Chr: 13 Mapping Details/Browsers
Description
Predicted to have SNAP receptor activity and SNARE binding activity. Predicted to be involved in Golgi vesicle transport; protein targeting to vacuole; and retrograde transport, endosome to Golgi. Predicted to localize to several cellular components, including Golgi apparatus; SNARE complex; and cytoplasmic vesicle. Orthologous to human VTI1B (vesicle transport through interaction with t-SNAREs 1B).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With vti1b Human Ortholog
No data available
Associated With vti1b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000727 Target SNARE coiled-coil homology domain
Domain IPR007705 Vesicle transport v-SNARE, N-terminal
Homologous_superfamily IPR010989 SNARE
Homologous_superfamily IPR038407 Vesicle transport v-SNARE, N-terminal domain superfamily
Domain Details Per Protein
Protein Length SNARE Target SNARE coiled-coil homology domain Vesicle transport v-SNARE, N-terminal Vesicle transport v-SNARE, N-terminal domain superfamily
UniProtKB:Q7SY45 225
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA vti1b-201 (1) Ensembl 1,804 nt
mRNA vti1b-202 (1) Ensembl 798 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations