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ZIRC
ZFIN ID: ZDB-GENE-030616-558
Gene Name: polycystic kidney disease 2-like 1
Gene Symbol: pkd2l1
Sequence Ontology ID : SO:0000704

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Attributions

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Previous Names: si:packtrz.2, si:xx-packtrz.2

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(Including Attributions)
Location: Chr: 13 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have calcium ion binding activity; cation channel activity; and muscle alpha-actinin binding activity. Involved in mechanosensory behavior. Predicted to localize to the membrane.  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
icm02 Small Deletion Exon 2 Frameshift, Premature Stop TALEN
sa6303 Point Mutation Unknown Splice Site ENU
sa22300 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa42207 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH pkd2l1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH pkd2l1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process mechanosensory behavior (more)
    Cellular Component integral component of membrane (more)
    Molecular Function calcium ion binding (more)
    GO Terms (all 10)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA ottdart00000001788 (1) 1982
    pkd2l1-201 (1) 2718
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM pkd2l1
    MARKER RELATIONSHIPS
    pkd2l1Contained in: [BAC] DKEY-51A16 (1) (order this), RP71-PACKTRZ (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    Genomic GenBank:BX530079 (1) 166397bp
    Select Tool
    Polypeptide UniProtKB:F1R6X2 (1) 790aa
    Sequence Information (all 5)
    ORTHOLOGY for pkd2l1 (Chr: 13)
    CITATIONS (27)