ZFIN ID: ZDB-GENE-030131-8376
Gene Name: pyridoxal (pyridoxine, vitamin B6) kinase a
Gene Symbol: pdxka    Nomenclature History

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Previous Names: pdxkl, cb1056 (1), fb10c12, si:dkey-281i8.2, wu:fa55a03, wu:fb10c12 (1), zgc:101900

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 9 Mapping Details/Browsers
Description: Predicted to have pyridoxal kinase activity. Predicted to be involved in pyridoxal 5'-phosphate salvage. Predicted to localize to cytosol. Is expressed in pronephros and ventricular zone. Orthologous to human PDXK (pyridoxal kinase).
Genome Resources: Alliance (1),  Gene:791775 (1),  Ensembl(GRCz11):ENSDARG00000088959 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 3 figures (5 images) from Thisse et al., 2001 [cb1056]
Wild-type Stages, Structures: Pharyngula:Prim-15 (30.0h-36.0h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
High Throughput Expression: Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH pdxka HUMAN ORTHOLOG
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Neuropathy, hereditary motor and sensory, type VIC, with optic atrophy 618511
DISEASE ASSOCIATED WITH pdxka VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process pyridoxal 5'-phosphate salvage (more)
Cellular Component cytosol (more)
Molecular Function pyridoxal kinase activity (more)
GO Terms (all 3)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA pdxka-201 (1)    Ensembl 682
pdxka-202 (1)    Ensembl 739
pdxka-203 (1)    Ensembl 1832
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM pdxka No data available
MARKER RELATIONSHIPS
pdxka Contained in: [BAC] CH211-141E20 (1)
pdxka Encodes: [EST] cb1056 (1) (order this), fa55a03, fb10c12
[cDNA] MGC:101900 (1), MGC:173751 (1), MGC:191432 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_001126449 (1) 1832 nt
Genomic GenBank:BX677668 (1) 182809 nt
Select Tool
Polypeptide UniProtKB:B0S7H1 (1) 305 aa
Sequence Information (all 28)
ORTHOLOGY for pdxka ( Chr: 9 )
CITATIONS (20)