Gene

rpe

ID
ZDB-GENE-030131-6837
Name
ribulose-5-phosphate-3-epimerase
Symbol
rpe Nomenclature History
Previous Names
  • ik:tdsubc_2c8
  • wu:fa07h08
  • wu:fb93d11
  • wu:fc20b11
  • xx:tdsubc_2c8
Type
protein_coding_gene
Location
Chr: 9 Mapping Details/Browsers
Description
Predicted to have metal ion binding activity and ribulose-phosphate 3-epimerase activity. Involved in cilium assembly. Predicted to localize to cytosol. Orthologous to several human genes including RPE (ribulose-5-phosphate-3-epimerase).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
2 figures from Shim et al., 2016
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With rpe Human Ortholog
No data available
Associated With rpe Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Family IPR000056 Ribulose-phosphate 3-epimerase-like
Family IPR026019 Ribulose-phosphate 3-epimerase
Homologous_superfamily IPR011060 Ribulose-phosphate binding barrel
Homologous_superfamily IPR013785 Aldolase-type TIM barrel
Domain Details Per Protein
Protein Length Aldolase-type TIM barrel Ribulose-phosphate 3-epimerase Ribulose-phosphate 3-epimerase-like Ribulose-phosphate binding barrel
UniProtKB:Q6PBW9 228
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA rpe-201 (1) Ensembl 1,660 nt
mRNA rpe-203 (1) Ensembl 538 nt
ncRNA rpe-003 (1) Ensembl 844 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations