Gene

arap1a

ID
ZDB-GENE-030131-6226
Name
ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1a
Symbol
arap1a Nomenclature History
Previous Names
  • fi39f07
  • si:ch211-135f11.1 (1)
  • wu:fi39f07
Type
protein_coding_gene
Location
Chr: 5 Mapping Details/Browsers
Description
Predicted to enable GTPase activator activity and phosphatidylinositol-3,4,5-trisphosphate binding activity. Predicted to be involved in regulation of actin cytoskeleton organization and regulation of cell projection organization. Predicted to act upstream of or within positive regulation of GTPase activity and signal transduction. Predicted to be active in cytoplasm. Orthologous to human ARAP1 (ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
No data available
Sequence Targeting Reagents
No data available
Human Disease
Associated With arap1a Human Ortholog
No data available
Associated With arap1a Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000159 Ras-associating domain
Domain IPR000198 Rho GTPase-activating protein domain
Domain IPR001164 Arf GTPase activating protein
Domain IPR001849 Pleckstrin homology domain
Domain IPR037858 ARAP, RhoGAP domain
1 - 5 of 10 Show all
Domain Details Per Protein
Protein Length ARAP, RhoGAP domain ArfGAP domain superfamily ARFGAP/RecO-like zinc finger Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein Arf GTPase activating protein PH-like domain superfamily Pleckstrin homology domain Ras-associating domain Rho GTPase-activating protein domain Rho GTPase activation protein
UniProtKB:A0A8M6YYD8
InterPro
696
UniProtKB:A0A8M9PYK7
InterPro
1091
UniProtKB:A0A8N7TBX5
InterPro
1092
1 - 3 of 3
Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 5
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA arap1a-201 (1)
Ensembl
Ensembl 3,445 nt
ZFIN BLAST
1 - 1 of 1
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACCH211-135F11ZFIN Curated Data
EncodesESTfi39f07
1 - 2 of 2
Show
Sequences
Type Accession # Sequence Length (nt/aa) Analysis
RNARefSeq:XM_695389 (1)3616 nt
ZFIN BLASTNCBI BLASTEnsemblUCSC BLAT
GenomicGenBank:CR391924 (1)142997 nt
MegaBLASTEnsembl
PolypeptideUniProtKB:A0A8N7TBX5 (1)1092 aa
ZFIN BLASTSIB BLASTEnsembl Protein Blast
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
No data available
Citations
TSV
1 - 1 of 1
Show
Your Input Welcome
We welcome your input and comments. Please use this form to recommend updates to the information in ZFIN. We appreciate as much detail as possible and references as appropriate. We will review your comments promptly.