Gene

paplnb

ID

ZDB-GENE-030131-6023

Name

papilin b, proteoglycan-like sulfated glycoprotein

Symbol

paplnb Nomenclature History

Previous Names

papln
si:dkey-65b13.4
wu:fi31b03
zgc:110061

Type

protein_coding_gene

Location

Chr: 20 Mapping Details/Browsers

Description

Predicted to have serine-type endopeptidase inhibitor activity. Orthologous to human PAPLN (papilin, proteoglycan like sulfated glycoprotein).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

MGC:110061 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With paplnb Human Ortholog

No data available

Associated With paplnb Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Conserved_site	IPR020901	Proteinase inhibitor I2, Kunitz, conserved site
Domain	IPR002223	Pancreatic trypsin inhibitor Kunitz domain
Family	IPR013273	ADAMTS/ADAMTS-like
Family	IPR050439	ADAMTS and ADAMTS-like
Homologous_superfamily	IPR036383	Thrombospondin type-1 (TSP1) repeat superfamily
Homologous_superfamily	IPR036880	Pancreatic trypsin inhibitor Kunitz domain superfamily
Repeat	IPR000884	Thrombospondin type-1 (TSP1) repeat

Domain Details Per Protein

Protein	Length	ADAMTS/ADAMTS-like	ADAMTS and ADAMTS-like	Pancreatic trypsin inhibitor Kunitz domain	Pancreatic trypsin inhibitor Kunitz domain superfamily	Proteinase inhibitor I2, Kunitz, conserved site	Thrombospondin type-1 (TSP1) repeat	Thrombospondin type-1 (TSP1) repeat superfamily
UniProtKB:Q503V4 InterPro	548
UniProtKB:A0A8M2B7L3 InterPro	538

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	paplnb-201 (1) Ensembl	Ensembl	1,975 nt	Select Tool ZFIN BLAST
mRNA	paplnb-202 (1) Ensembl	Ensembl	676 nt	Select Tool ZFIN BLAST
mRNA	paplnb-203 (1) Ensembl	Ensembl	1,670 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations