ZFIN ID: ZDB-GENE-030131-571
Gene Name: SNW domain containing 1
Gene Symbol: snw1    Nomenclature History

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Previous Names: fb37b08, skiip (1), wu:fb37b08, zgc:123090

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 20 Mapping Details/Browsers
Description: Involved in neural crest formation and positive regulation of BMP signaling pathway. Predicted to localize to spliceosomal complex. Is expressed in ectoderm; mesoderm; and neural plate. Human ortholog(s) of this gene implicated in breast cancer and pancreatic cancer. Orthologous to human SNW1 (SNW domain containing 1).
Genome Resources: Alliance (1),  Gene:321852 (1),  Ensembl(GRCz11):ENSDARG00000091563 (2)
GENE EXPRESSION
All Expression Data: 4 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7151890]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hi296bTg Transgenic Insertion Intron 1 Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-snw1 N/A 1
    DISEASE ASSOCIATED WITH snw1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH snw1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process neural crest formation (more)
    Cellular Component spliceosomal complex (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS No data available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM snw1 No data available
    MARKER RELATIONSHIPS
    snw1 Encodes: [EST] fb37b08, IMAGE:7151890 (1)
    [cDNA] MGC:123090 (1), MGC:158572 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001002864 (1)
    Genomic GenBank:CABZ01084804 (1) 67151 nt
    Select Tool
    Polypeptide UniProtKB:A3KMS7 (1) 558 aa
    Sequence Information (all 24)
    ORTHOLOGY for snw1 ( Chr: 20 )
    CITATIONS (26)