ZFIN is now using GRCz12tu for Genomic Data

Gene

rbm44

ID

ZDB-GENE-030131-5562

Name

RNA binding motif protein 44

Symbol

rbm44 Nomenclature History

Previous Names

fi04c05
si:dkey-189g17.2
si:dkey-89p3.3 (1)
wu:fi04c05

Type

protein_coding_gene

Location

Chr: 9 Mapping Details/Browsers

Genome Assembly

GRCz12tu

Annotation Status

Current

Description

Predicted to enable protein homodimerization activity. Predicted to be located in cytoplasm and intercellular bridge. Orthologous to human RBM44 (RNA binding motif protein 44).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With rbm44 Human Ortholog

No data available

Associated With rbm44 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR000504	RNA recognition motif domain
Homologous_superfamily	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily
Homologous_superfamily	IPR035979	RNA-binding domain superfamily

Domain Details Per Protein

Protein	Additional Resources	Length
UniProtKB:B0S6S9	InterPro
UniProtKB:A0AB32TUT7	InterPro	956
UniProtKB:A0AB32TUT9	InterPro	955
UniProtKB:A0AB32TY41	InterPro	945
UniProtKB:A0AB32TZV1	InterPro	926
UniProtKB:A0AB32U0F6	InterPro	960
UniProtKB:A0AB32U1H0	InterPro	959
UniProtKB:A0AC58GEP1	InterPro	964
UniProtKB:A0AC58GEP3	InterPro	959
UniProtKB:A0AC58GEP4	InterPro	963
UniProtKB:A0AC58GEP5	InterPro	960
UniProtKB:A0AC58GEP6	InterPro	959
UniProtKB:A0AC58GEP7	InterPro	960
UniProtKB:A0AC58GEQ0	InterPro	956
UniProtKB:A0AC58GEQ1	InterPro	950
UniProtKB:A0AC58GEQ2	InterPro	949
UniProtKB:A0AC58GEQ3	InterPro	955
UniProtKB:A0AC58GEQ4	InterPro	950
UniProtKB:A0AC58GEQ5	InterPro	946
UniProtKB:A0AC58GEQ6	InterPro	946
UniProtKB:A0AC58GEQ7	InterPro	945
UniProtKB:A0AC58GEQ8	InterPro	954
UniProtKB:A0AC58GEQ9	InterPro	929
UniProtKB:A0AC58GER0	InterPro	950
UniProtKB:A0AC58GER1	InterPro	949
UniProtKB:A0AC58GER3	InterPro	930
UniProtKB:A0AC58GER4	InterPro	922
UniProtKB:A0AC58GER5	InterPro	953
UniProtKB:A0AC58GER6	InterPro	925
UniProtKB:A0AC58GER7	InterPro	926
UniProtKB:A0AC58GER8	InterPro	916
UniProtKB:A0AC58GER9	InterPro	921
UniProtKB:A0AC58GES0	InterPro	921
UniProtKB:A0AC58GES1	InterPro	915
UniProtKB:A0AC58GES2	InterPro	916
UniProtKB:A0AC58GES3	InterPro	922
UniProtKB:A0AC58GES4	InterPro	925
UniProtKB:A0AC58GES5	InterPro	912
UniProtKB:A0AC58GES6	InterPro	915
UniProtKB:A0AC58GES7	InterPro	911
UniProtKB:A0AC58GES8	InterPro	889
UniProtKB:A0AC58GET0	InterPro	911
UniProtKB:A0AC58GET1	InterPro	925
UniProtKB:A0AC58GET2	InterPro	859
UniProtKB:A0AC58GET3	InterPro	888
UniProtKB:A0AC58GET4	InterPro	854
UniProtKB:A0AC58GET6	InterPro	949
UniProtKB:A0AC58GET7	InterPro	855
UniProtKB:A0AC58GET9	InterPro	889
UniProtKB:A0AC58GEU3	InterPro	888
UniProtKB:A0AC58GEV6	InterPro	916

Transcripts

Genome Browsers

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	si:dkey-189g17.2-201 (1) Ensembl	Ensembl	3,398 nt	Select Tool ZFIN BLAST
mRNA	si:dkey-189g17.2-202 (1) Ensembl	Ensembl	562 nt	Select Tool ZFIN BLAST
mRNA	si:dkey-189g17.2-203 (1) Ensembl	Ensembl	413 nt	Select Tool ZFIN BLAST
ncRNA	si:dkey-189g17.2-004 (1) Ensembl	Ensembl	470 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Genome Browsers

NCBI Map Viewer

ZFIN

Orthology

Comparative Orthology: Alliance

Citations