Gene

trmt9b

ID
ZDB-GENE-030131-4851
Name
tRNA methyltransferase 9B
Symbol
trmt9b Nomenclature History
Previous Names
  • wu:fe01e11
  • zgc:73340
Type
protein_coding_gene
Location
Chr: 15 Mapping Details/Browsers
Description
Predicted to enable tRNA (carboxymethyluridine(34)-5-O)-methyltransferase activity and tRNA binding activity. Predicted to be involved in tRNA methylation and tRNA wobble uridine modification. Predicted to act upstream of or within methylation. Predicted to be active in cytoplasm and nucleus. Orthologous to human TRMT9B (tRNA methyltransferase 9B (putative)).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
sa816Allele with one point mutationUnknownSplice SiteENU
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Sequence Targeting Reagents
No data available
Human Disease
Associated With trmt9b Human Ortholog
No data available
Associated With trmt9b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR013216 Methyltransferase type 11
Family IPR051422 AlkB Family tRNA Methyltransferase/Dioxygenase
Homologous_superfamily IPR029063 S-adenosyl-L-methionine-dependent methyltransferase superfamily
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Domain Details Per Protein
Protein Length AlkB Family tRNA Methyltransferase/Dioxygenase Methyltransferase type 11 S-adenosyl-L-methionine-dependent methyltransferase superfamily
UniProtKB:Q6PBM3 412
1 - 1 of 1
Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 15
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA trmt9b-202 (1) Ensembl 2,565 nt
mRNA trmt9b-203 (1) Ensembl 733 nt
ncRNA zgc:73340-002 (1) Ensembl 369 nt
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Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACCH211-250I4ZFIN Curated Data
ContainsSNPrs3728742
    ZFIN Curated Data
    ContainsSNPrs3728743
      ZFIN Curated Data
      EncodesESTfe01e11
      EncodescDNAMGC:73340ZFIN Curated Data
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      Sequences
      Orthology
      Comparative Orthology
      Alliance
      Gene Tree
      Ensembl
      Species Symbol Chromosome Accession # Evidence
      HumanTRMT9B8
      Amino acid sequence comparison (1)
      Citations
      1 - 3 of 3
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