Gene

psmd11a

ID

ZDB-GENE-030131-2711

Name

proteasome 26S subunit, non-ATPase 11a

Symbol

psmd11a Nomenclature History

Previous Names

im:7148232
wu:fb44g10
wu:fc16c05

Type

protein_coding_gene

Location

Chr: 3 Mapping Details/Browsers

Description

Predicted to have structural molecule activity. Predicted to be involved in proteasome assembly; stem cell differentiation; and ubiquitin-dependent protein catabolic process. Predicted to localize to proteasome regulatory particle, lid subcomplex. Orthologous to human PSMD11 (proteasome 26S subunit, non-ATPase 11).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

IMAGE:7148232 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With psmd11a Human Ortholog

No data available

Associated With psmd11a Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR000717	Proteasome component (PCI) domain
Domain	IPR040773	26S proteasome regulatory subunit Rpn6, N-terminal
Domain	IPR040780	6S proteasome subunit Rpn6, C-terminal helix domain
Family	IPR050871	26S Proteasome and COP9 Signalosome Components
Homologous_superfamily	IPR011990	Tetratricopeptide-like helical domain superfamily
Homologous_superfamily	IPR036390	Winged helix DNA-binding domain superfamily

Domain Details Per Protein

Protein	Length	26S Proteasome and COP9 Signalosome Components	26S proteasome regulatory subunit Rpn6, N-terminal	6S proteasome subunit Rpn6, C-terminal helix domain	Proteasome component (PCI) domain	Tetratricopeptide-like helical domain superfamily	Winged helix DNA-binding domain superfamily
UniProtKB:F6P3G4 InterPro	421

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	psmd11a-203 (1) Ensembl	Ensembl	734 nt	Select Tool
mRNA	psmd11a-201 (1) Ensembl	Ensembl	2,015 nt	Select Tool
mRNA	psmd11a-204 (1) Ensembl	Ensembl	4,900 nt	Select Tool ZFIN BLAST
ncRNA	psmd11a-003 (1) Ensembl	Ensembl	832 nt	Select Tool

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations