Gene

coro2aa

ID

ZDB-GENE-030131-2258

Name

coronin 2Aa

Symbol

coro2aa Nomenclature History

Previous Names

coro2a
wu:fc02b08
zgc:73379

Type

protein_coding_gene

Location

Chr: 1 Mapping Details/Browsers

Description

Predicted to have actin filament binding activity. Predicted to localize to integral component of membrane and transcriptional repressor complex. Is expressed in several structures, including apical ectodermal ridge pectoral fin bud; ectoderm; endoderm; presumptive ectoderm; and spinal cord. Orthologous to human CORO2A (coronin 2A).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

6 figures from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

IMAGE:7151323 (14 images)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With coro2aa Human Ortholog

No data available

Associated With coro2aa Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Conserved_site	IPR019775	WD40 repeat, conserved site
Domain	IPR015048	Domain of unknown function DUF1899
Family	IPR015505	Coronin
Homologous_superfamily	IPR015943	WD40/YVTN repeat-like-containing domain superfamily
Homologous_superfamily	IPR036322	WD40-repeat-containing domain superfamily
Repeat	IPR001680	WD40 repeat

Domain Details Per Protein

Protein	Length	Coronin	Domain of unknown function DUF1899	WD40 repeat	WD40 repeat, conserved site	WD40-repeat-containing domain superfamily	WD40/YVTN repeat-like-containing domain superfamily
UniProtKB:F1QR96 InterPro	533
UniProtKB:A0A0R4IRX7 InterPro	528
UniProtKB:Q6P935 InterPro	528

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	coro2a-201 (1) Ensembl	Ensembl	2,854 nt	Select Tool ZFIN BLAST
mRNA	coro2a-204 (1) Ensembl	Ensembl	725 nt	Select Tool ZFIN BLAST
mRNA	coro2a-205 (1) Ensembl	Ensembl	2,653 nt	Select Tool ZFIN BLAST
mRNA	coro2a-206 (1) Ensembl	Ensembl	1,857 nt	Select Tool ZFIN BLAST
ncRNA	coro2a-002 (1) Ensembl	Ensembl	508 nt	Select Tool ZFIN BLAST
ncRNA	coro2a-003 (1) Ensembl	Ensembl	914 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations