ZFIN is now using GRCz12tu for Genomic Data
Gene
tlcd3ba
- ID
- ZDB-GENE-030131-2046
- Name
- TLC domain containing 3Ba
- Symbol
- tlcd3ba Nomenclature History
- Previous Names
-
- fam57ba
- fb95d07
- wu:fb95d07
- zgc:73225
- Type
- protein_coding_gene
- Location
- Chr: 3 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable sphingosine N-acyltransferase activity. Acts upstream of or within several processes, including central nervous system development; lipid homeostasis; and startle response. Predicted to be located in membrane. Predicted to be active in endoplasmic reticulum. Is expressed in brain; central nervous system; epiphysis; head; and neurons. Human ortholog(s) of this gene implicated in cone-rod dystrophy 22. Orthologous to human TLCD3B (TLC domain containing 3B).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 7 figures from 3 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- MGC:73225 (8 images)
Wild Type Expression Summary
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| cone-rod dystrophy 22 | Alliance | Cone-rod dystrophy 22 | 619531 |
Domain, Family, and Site Summary
Domain Details Per Protein
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
fam57ba-202
(1)
|
Ensembl | 745 nt | ||
| mRNA |
fam57ba-203
(1)
|
Ensembl | 923 nt | ||
| mRNA |
fam57ba-204
(1)
|
Ensembl | 886 nt | ||
| mRNA |
fam57ba-205
(1)
|
Ensembl | 911 nt | ||
| mRNA |
fam57ba-206
(1)
|
Ensembl | 891 nt | ||
| mRNA |
fam57ba-208
(1)
|
Ensembl | 1,382 nt | ||
| mRNA |
tlcd3ba-201
(1)
|
Ensembl | 1,141 nt | ||
| ncRNA |
fam57ba-007
(1)
|
Ensembl | 680 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers