Gene

lrch1

ID
ZDB-GENE-030131-1783
Name
leucine-rich repeats and calponin homology (CH) domain containing 1
Symbol
lrch1 Nomenclature History
Previous Names
  • fb80e05
  • si:ch211-260b17.8
  • wu:fb80e05
Type
protein_coding_gene
Location
Chr: 9 Mapping Details/Browsers
Description
Predicted to be involved in cellular response to chemokine and negative regulation of T cell migration. Predicted to localize to cytoplasm. Orthologous to human LRCH1 (leucine rich repeats and calponin homology domain containing 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With lrch1 Human Ortholog
No data available
Associated With lrch1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001715 Calponin homology domain
Family IPR050216 Leucine-rich repeat domain-containing protein
Homologous_superfamily IPR032675 Leucine-rich repeat domain superfamily
Homologous_superfamily IPR036872 CH domain superfamily
Repeat IPR001611 Leucine-rich repeat
Repeat IPR003591 Leucine-rich repeat, typical subtype
Domain Details Per Protein
Protein Length Calponin homology domain CH domain superfamily Leucine-rich repeat Leucine-rich repeat domain-containing protein Leucine-rich repeat domain superfamily Leucine-rich repeat, typical subtype
UniProtKB:A0A8M9PSW1 749
UniProtKB:A0A8M9Q542 748
UniProtKB:A0A0R4I9F0 730
UniProtKB:A0A8M2BFQ2 692
UniProtKB:A0A8M9QG10 786
UniProtKB:E9QFG1 655
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA lrch1-201 (1) Ensembl 6,507 nt
mRNA lrch1-202 (1) Ensembl 2,108 nt
mRNA lrch1-203 (1) Ensembl 6,396 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations