Genomic Feature

rc2

ID
ZDB-ALT-260706-7
Name
rc2
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one delins (1)
Protocol
embryos treated with spontaneous
Lab of Origin
Zebrafish International Resource Center (ZIRC)
Current Source
Zebrafish International Resource Center (ZIRC)    ( order this )
Other Pages
Notes
No data available
Genome Browser
Genome Browsers
Variants
Variant Type
Delins
Variant Location
Chr 12: 25088725 - 25088918 (GRCz11) (1) Details
Nucleotide Change
GAAGCTGTCTTTGCATGCATAAAATGCACCCAGACTTCATAAGACTGTATCGATGTCCTTTAATAATCATATCACAAATGTATGTAGAATATTTACTTATTGCAGCTATTTAGGAGAGCAATATTATGCTCAAATGTTCTTGATAGGACATATCAACATCTGTAACTCACACACTGTGCATTTTGTTCCTCTGT/ATAGCTGGATTGTTGC
Variant Notes
The mutation affects larval xanthophore pigmentation (recessive mutation). The  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
16 bp inserted / 194 bp deleted (1)
Transcript Consequence
Splice Site (1)
Protein Consequence
None
Sequences
Flanking Sequence
CCTGGGAGAGAGTTTAGGGCTGGGAGGTCAATGGGTTCTTTTCAGTAAGCTGATAAATAAACTAAATAAATATTGTCTCCTAATTCACTTGTAGGTTCACATAGGATATCTGCCAAGCAAAAAGGTTGTTGGCCTCAGTAAGCTTGCAAGGTGAGTATACAGAATGCAAACACACATGCACACACACACATGCACAGATACATGATTGTGCCAGTCTCAGACGGATGGTAATGGGCCTTGTTCTCACATCAGAGAGGGACTGAAAAAGAGAACCTATTAGTTACAAGTGGCTGAGTTCTTCTGTTATCACAGCCCTTTCACTTGAGGCTTAAATCCAAAGCCTGGCACTGTATCCTGTTCCATCTGAAAAAGGCCAGACTCGCTGACTTCTGGCGCTGAGGAAATCCCCCTCGACTCCCACCTCCACTGCGGGGGGCTTGTGGGAAACATTAACATCGCTATCCTCACATATTATCCTCACATAATTTGATGTGCACCCT
GAAGCTGTCTTTGCATGCATAAAATGCACCCAGACTTCATAAGACTGTATCGATGTCCTTTAATAATCATATCACAAATGTATGTAGAATATTTACTTATTGCAGCTATTTAGGAGAGCAATATTATGCTCAAATGTTCTTGATAGGACATATCAACATCTGTAACTCACACACTGTGCATTTTGTTCCTCTGT/ATAGCTGGATTGTTGC AGGATTGTTGAAATCTACAGTCGCAGACTTCAAGGTAACTATCTTATATTTTTATTACGTACATATCATGATTTACATTTTAAATGAATGCTGTTTATGCTAATTTGAGCACCAAAATTTTAAATCAATTCTAAAAAATTTAGCCTGAACTCATAAGAAAACGTAACTATTTTATGTTTCAACAGTTTAGTTGCTAATTCATACAAATTCATATGAGTTCAGTTGTAAGAAAATGTAGGATTTTAAAAAGGAGGCGTGGCACCCAATCCCGCCCCTAAACCAAACCGTCATTAATGGATAAGCAAATCATAATAAATTGTATGAATGAGACTACCAATTCATACGTATTAGCCACTAAAACAAAAGTTACGAATGGACCCTTTTCACATGTCCGGGTTTCTTGGTAGCGGAAGGCATCATAGTTTGGTAAACTTATAGCGCAGTGAATGGGAAAGTATAAAAAAATTATTATTTTTACAATCCAATTTGCTAAAATAATA
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations