Genomic Feature
ya519
- ID
- ZDB-ALT-240514-11
- Name
- ya519
- Synonyms
-
- Δ64 (1)
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Hoffman Lab
- Current Source
- Other Pages
-
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 1: 45526436 - 45526499 (GRCz11) (1) Details
- Nucleotide change
- GTAGAGGGGCAGTTTGAAGGAGGAAACAAGGGAGACGAAAGACAGGACGCGGCAGTCGGAGAAA/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 64 bp deleted (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
TGCGTTTATCATACCTTGGCAGCCATGATCATGGAAGACCCTCCACGGATACCCAGAATGGGGATGTGCGTCTGAGCCGAGATGAAGTCCAATATCTGGGCGATGGCCTCCTGATCGGTATCATCCCCGAACACCACACCCTGGAGCCAGTTGCGTGACATCAGAGCACAGATGCGGTTGATGATACTCTTAGGGTCGGTTTCATTCATGGTGACCAGCTCGACTTTCGGTGGAAGAGGCACGTGTAGAAAGTCCTCTTTCTCCAGACCTTCAGAAAGCGACACCTCGCTGGAGTTTCCCACTAGGATCACCGCGATGCTAAGGCCTTGAGCAAACTTTGGTGACATGGGAGGACCCACTGGACTGACTCCTGGTGGTGGATAATGAGGAGGACTGATAATCGATTGGCTGTTCATGCCTCCGGTGGGCGTCCCGATCCCACCTCCGCGGCGAGACTCGCAGGTGGGGAAGAAGAAGAGCGATAGGAGAAGGAGCGAGAT
GTAGAGGGGCAGTTTGAAGGAGGAAACAAGGGAGACGAAAGACAGGACGCGGCAGTCGGAGAAA/- GGGGAAGAGGAGAGGTGGAGGCTGACAAGCATGGCGGAGGAGTGAAGGTACAGTCCCTGCAGACAGAGAAAGAGAGGGAGAACGTTTTAGTTTGTGAGCTGAATTCACATTAAAAACTACATTGAATCTGACTGGTGAACAGTTAAGTCAAGTTAAACCAGCAAGAGACCTGAGGCTTTAAAAAGAGCATATGTCCTCATTTCAAGGGTCTGTCCACTCCATTATTGACATATGTTGGACAGAAATCACAGAAACATAGGCAGTCTTGGGAAATGAGGTCGTTTGCAGCAGGCAATACACACACAAACACACTAAGGACATACAAAAGACTTCTAATGTTTTTACATGAAGCTAATCAGAATTAGGAAGCCTAAAATAAATCAAGCTGTAAAGACTAATTAACATAATATAACTTTGACAATTAGGATAGAGTTATAAAAATGTTATAAGGGTACATTTAAACAGCTCTAAGACTGAGATTTTACTTATTGGCACACCCT - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| grin2bbya519/+ (AB) | Heterozygous | Unknown |
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Supplemental Information
- Genotyping protocol
- None
- Zebrafish Nomenclature Committee (2025) Nomenclature Data Curation (2025). Nomenclature Committee Submission.
- Weinschutz Mendes, H., Neelakantan, U., Liu, Y., Fitzpatrick, S.E., Chen, T., Wu, W., Pruitt, A., Jin, D.S., Jamadagni, P., Carlson, M., Lacadie, C.M., Enriquez, K.D., Li, N., Zhao, D., Ijaz, S., Sakai, C., Szi, C., Rooney, B., Ghosh, M., Nwabudike, I., Gorodezky, A., Chowdhury, S., Zaheer, M., McLaughlin, S., Fernandez, J.M., Wu, J., Eilbott, J.A., Vander Wyk, B., Rihel, J., Papademetris, X., Wang, Z., Hoffman, E.J. (2023) High-throughput functional analysis of autism genes in zebrafish identifies convergence in dopaminergic and neuroimmune pathways. Cell Reports. 42:112243112243
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