Genomic Feature
zju34
- ID
- ZDB-ALT-240206-2
- Name
- zju34
- Synonyms
-
- -1 (1)
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one delins (1)
- Protocol
- embryos treated with
- Lab of Origin
- Fudi Wang Lab
- Current Source
- Other Pages
-
Notes
No data available
Variants
- Variant Type
- Delins
- Variant Location
- Chr 17: 37216399 - 37216400 (GRCz11) (1) Details
- Nucleotide change
- CG/T
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 1 bp inserted / 2 bp deleted in Exon 1 (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
TAAATGAAATGTATCTTATATGCGTCGAACAACTGACATTTCGTGAGTTGCCTATAGCAACAGCGTTTACTTGCAGCATTGATCATCTAAACCATCGCGAAATGTAAATAATAACATTTTGTTTACATTTTTTTATTTTTTGCATTTTTAATTTGAAGACAAAATGGGTTTAGGGCAGAATCGGATGCGTTTGCTGTGCATGCTCACTTTAACGCTGGTGTTTTTTGTTGTGGAAGTTGTGGTCAGCAGAATAACAGCATCTCTCGCGATGTTGTCGGACTCTTTTCACATGCTGTCGGACGTAATAGCTCTAACAGTGGCTTTAATCGCGGTCAGCTTTGCGGAGACCACTCGATCCACCAGTAAGAACACGTACGGATGGATCCGCGCAGAAGTGATGGGAGCTCTGGTGAACGCCGTGTTTTTGACAGCCCTCTGCTTCACTATCTTTTTAGAGGCCGTTGAGCGCTACACGCAGCCGCATGAGATCGAGAACCCAC
CG/T GTGGTCATCTGGGTCGGTGTTGCGGGTCTTTTGGTGAATGTGCTCGGTCTGTTTCTCTTCCACGGACACGCGGGGTTCGGTGGGCACGGGCATGCGCATGGTGGGCACTCTCACGCCGGACACTCTCACGCGCACCAGACAAACCACAGAGAAAAACCAAAAGCGCACGAAGAAGCATGCACTCTCATGATAAACAGTTCACAAGGAGATCACACTTGCGAGCAGAAATCAGGTATTTATGTTGGTCAAAAATAAAATACTTTTTAAACTCCTCATGATAGTGTATTAGAGTTAAAATCATCATTACATTGTGTTTACATTTTCTTTCTGATCAAAAATAAGGGCTACAGAATCTATAGAGGACACCCACTAAAACATCATTCAATAGATACATTGTTATAATGTGAACATTGTTATAAAAGTAACATAACAATATATATACTAAGAAAAATCTTACCTGGCATATTTAGAACAAGAATATTGTAATGGTACAGCCCCAA - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| slc30a1bzju34/zju34 | Homozygous | ♀+/- ♂+/- | |||
| slc30a1bzju34/+ | Heterozygous | Unknown | |||
| slc30a1bzju34/zju34 + MO1-mt2 | Complex | ||||
| slc30a1azju32/zju32; slc30a1bzju34/zju34 | Complex | 2 figures  from Xia et al., 2022 | 2 figures from Xia et al., 2022 | ||
| slc30a1azju32/zju32; slc30a1bzju34/zju34; el2Tg/el2Tg | Complex | Fig. 3 from Xia et al., 2022 | Fig. 3 from Xia et al., 2022 | ||
| slc30a1azju33/zju33; slc30a1bzju34/zju34 | Complex | 2 figures from Xia et al., 2022 | 2 figures from Xia et al., 2022 | ||
| slc30a1azju33/zju33; slc30a1bzju34/zju34; el2Tg/el2Tg | Complex | Fig. 3 from Xia et al., 2022 | Fig. 3 from Xia et al., 2022 | ||
| slc30a1azju32/zju32; slc30a1bzju34/zju34 + MO1-mt2 | Complex | Fig. 4 from Xia et al., 2022 | Fig. 4 from Xia et al., 2022 | ||
| slc30a1azju33/zju33; slc30a1bzju34/zju34 + MO1-mt2 | Complex | Fig. 4 from Xia et al., 2022 | Fig. 4 from Xia et al., 2022 |
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Supplemental Information
- Genotyping protocol
- None
- Xia, Z., Yang, X., Bi, X., Tong, X., Min, J., Wang, F. (2022) Zinc transporter Slc30a1 regulates melanocyte development by interacting with mt2 in zebrafish. European journal of cell biology. 101:151272
- Xia, Z., Bi, X., Yang, S., Yang, X., Song, Z., Wei, J., Xu, P., Rink, L., Min, J., Wang, F. (2021) Metal transporter Slc30a1 controls pharyngeal neural crest differentiation via the zinc-Snai2-Jag1 cascade. MedComm. 2:778-797
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