Genomic Feature

zf3678

ID
ZDB-ALT-240103-5
Name
zf3678
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Karasik Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 19
Variants
Variant Type
Small Deletion
Variant Location
Chr 19: 20763461 - 20763479 (GRCz11) (1) Details
Nucleotide change
CATGCTCTTCTTTCCTGAA/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
19 bp deleted in Exon 9 (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
AAAAACATCAATACATCAAAGGCAATGTTGTTATTAATCTTTCACATGTGCAAGACTGTGACAAAAGGTAAAAAAATCTAGTCCACGGCTACAATTTCATTGTCCATCAGTCTTAGTACATGATGTAACTACAGGAGAAGAGTCAAGCTTTAAATAGGAAAAACTATCTAAACTATGATGCTAATGTCTGATGCTAACAGTCTAATCTGATTCAATGATATATGCTAAGTTAAGCTAAAAAAGTGCTCACACTAGACCCAGAGATAAAAATAAAATATAAATATCATATAAAATATAAATATAAAAGATAAAATATTAAAACCAACTATTTAACTGTATGGGATTTGTAAAATAAAATGTAAAAAAAAAAAAAAATGTTAAATTAATATTTTAAGGTGGAGTGTTAAAATAAAAAATAAAAAATAAAACTGGCATATTAATAAATAATCAAATTTGTATGTAAATAAAAGTTGAAAAAAAAAAACATACCATCTGCCAGT
CATGCTCTTCTTTCCTGAA/- CATGTTTTCTGTCCTCCAGGCCCCTTTCTGCCATCCTTGAATAGTCTCTTGGCCATTGCTCACTCTGTAGTAACAGTCTTTGGTCACATTGTAACAAATGTGGAAGCGTTTGCTTTCCTTCTCAGATTCTGAGGGTGTGAAGACATTTTCCTGTGTGTCCTGGGAAGAAACAAACATTAGTAACGTCAATCAAATTTATGCATCTACTCTAATGTCTTTTATGACAGATCTTAAATCAAGCAAAATCGATTACGGTCAAGCATCTCACCTCTTTAGCATTGCTTGCACCAGTTTCTCCTCGAGCTGCTCTCCAAGCCAGGGATCCTGACATGCGGCCACCCAGTTCTCCAGGTTGAGGACTTTTAGGAGAAATAAACTCCACCAGCTCCACCAGCAGCCTTTGCAACAGCTGCTGCTTTCTCTCTGCTCCTAGAAACTGCTGCCTCTTTAGGAAAGAAGTGGCAATGAGAGGTGAATTGTTTGTCTAGATTAACTATGAA
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
ngly1zf3678/zf3678 (AB)Homozygous♀+/- ♂+/-2 figures with image from Mesika et al., 2022Fig. 3 with image from Mesika et al., 2022
ngly1zf3678/zf3678; mde4Tg; mde6Tg (AB)ComplexFig. 4 with image from Mesika et al., 2022Fig. 4 with image from Mesika et al., 2022
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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