Genomic Feature

iis3

ID
ZDB-ALT-231103-4
Name
iis3
Synonyms
  • nog2E3del1 (1)
Affected Genomic Region
Construct
None
Type
Allele with one delins (1)
Protocol
Lab of Origin
Vertebrate Development and Regeneration Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 10
Variants
Variant Type
Delins
Variant Location
Chr 10: 38797310 - 38797542 (GRCz11) (1) Details
Nucleotide change
ATTTAATCTAGTGTACATTTGTAGATCAATTGTTTGTCTTGAAAAATACCTAATACATGTACAAAATTAGCTGGTTCAGAAAAACAAAAATCACAAATTAGACAAAAACATCTAAATTAAAGTACATGAAATTTCACCCAAAAAGAAATTCCTACAATACAATGCAGTTTTATTTTCAAATGCTTTTAAATTTAAGTTCAACCCGTGTTATTAAAAGTCTGTAAAAAGTTCTG/C
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
1 bp inserted / 233 bp deleted (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
AATCTTTCAGAAGTAACATACTGTATATTCAGATACTTGTTTATTTGTACTCAAATATTTAAATATTGAATATTTGATATTATACAATATGCAAACAGGGCTTAGAAAAAAATCGCAAATTAATCAAAAGCACATAAAATAAAGTACATTAAATTTCATCCCCAAAAAAGATAAAATCTCACATTTTGATTTATGAGATGACTTACTTTTGAAAATATTTTATCATTTATTTATTTGATTGAAAACTTGTTTTAACCCTTGAGTCTTTTAATATTGTGTTGAAAAAAAATGTATTGGCGGTTCATTCCGCTGTGGTGACCCCTAATGAATAATGGGACTAAGCCAAAGAAAAATCAATGAAGGAAAATAAACGTTTGATGAATGTCTTTAAACTTTTTTTTTTCAAAGAAAGGTGCTTAAAATAACCTTTTCCACTGTATATTTTTATATTATTGAAAATGTCCTATCAATGCCAATATAGAGTGCCTTTTAGTTTTATG
ATTTAATCTAGTGTACATTTGTAGATCAATTGTTTGTCTTGAAAAATACCTAATACATGTACAAAATTAGCTGGTTCAGAAAAACAAAAATCACAAATTAGACAAAAACATCTAAATTAAAGTACATGAAATTTCACCCAAAAAGAAATTCCTACAATACAATGCAGTTTTATTTTCAAATGCTTTTAAATTTAAGTTCAACCCGTGTTATTAAAAGTCTGTAAAAAGTTCTG/C CAACAGGAAAAGTCACTGCTGGTGAATGGGAATGAATGCTGACTTTAAGGAGTGTGTGTGGCGGGGCTGTTTGAGCACAATGACAGCTGCGTTTAGGGCCAGCAGAAATATGGCTTTGTCTTTTGAAAACACATTAGCATTTGTCCACTGATAGTGTGTAACCAGCCATCGCCAGAGCCTTTCAGAACTAGCCAGCCGATTTATTTAAGTAATGTGCGATCAATATTTACCCTGAAAACCACAAGACCGGCCCCTCAGATTAACCCTTACAACCTTGAAACAAGAGTTGTGTGCTGTAGAAAAGAGCAGGATGGAAACACTAAACCTTTACAAACAATATTGCATTAAGATTTGTTTATATTTGTGAAAACTCATCTCTTATTCTCGGCATTCATTTGATTAAACACAATAAGAGTAATGTTGTACTGTGCATAAGCAACTAATCTTGGGTATTTAAAGCATACAAATATAACTGGTTTAGAAACAAATATAATTTTAGA
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
nog2iis3/iis3HomozygousUnknownFigure 1 with image from Amorim et al., 2020
nog2iis1/+; nog2iis3/iis3ComplexFigure 1 with image from Amorim et al., 2020
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Supplemental Information
Genotyping protocol
None
Citations
TSV
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