Genomic Feature

nni101

ID
ZDB-ALT-230915-3
Name
nni101
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Ophthalmic Genomics Laboratory
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 25
Variants
Variant Type
Small Deletion
Variant Location
Chr 25: 12824477 - 12824490 (GRCz11) (1) Details
Nucleotide change
GCATCGGCTGCGAG/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
14 bp deleted in Exon 1 (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
TTATTAAAAAGAAAGTCTGAATATAAAACCAACTTTACCTCAATCCTATTAATCACGTCAGCCTTTACCTTTAATAGAGACTAAAAAACGCTGTTTATTAGGACTAAATGTTATATTTATCTACTGGAAAGAAAAAATCTTAAAGAGGTTATGTTTTTAATCTTTGACTGGCCCGGGAACATTTCCTTCAACAGTTTGGCGTGAAGTGTGGCCACCGTGCTCAATGTTTACAGCACAGAAAAAACATGGCGCGAAATCAAACAAATACATGATTTCTGTGTTCACTATGAGATAATGAACAGCATTACGCTTTTAAGAATTTTAAAGTAACGTGTAATGCATTAATAAACACATTCCAAGTCTGTGGTTTTCATTGCAGGTTATTATAATTGATACTCGGCGATGATGGGCCTGATTCCTCCAGCACAAAGAGAGTCCGCCTTCCTCCAACTTACCACCTCAATATTCTTAAAGCCGGTGAGCACCAGGTTTTTCAGGAG
GCATCGGCTGCGAG/- CTCCCGCCCCGACCACCAGCACCCGGCAGGAGGAGAGGGAGTCAGCGAGCTGTTTTCGGAGAGGACCGACTAGTTCTGCCATTGTCGGCTCAGCGTTTCGGCGGCGCGCGGACGAGCAGCGGTTTGATCCTGCGGGGAGGGAAGTGGGTGCGCATGCGCAGAGACTGCTAAAAAGCGCGAGGGTCGTATAAGGTTTTAACTGGCGACCTCTGTTGGCTCGGCTGAGCTGCAGAAATGTGTTGTTTAAAGGGATAGTTCACCCAAAACGGAAAACTGTCATCATTTACTCACATTGTACTTGTTGCAAACCTCTACGTGTTTCTTTTGAACAAATAAGAAGATATTCTGAAGAAAGCTGGAAACTTGTAAACATTGACTTCCACAGCATTTGTACTATGTTACAGTTTTATTTAATATCTAGCAAATATCTTCTTTTGTGTTCACTGGAATAAAGAATTTACTCATAGGGTTGAAACCAGACGAGGGAGAGTAAATAATGA
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
uba2nni101/nni101 (AB/TL)Homozygous♀+/- ♂+/-3 figures with image from Schnur et al., 2021
uba2nni101/+ (AB/TL)Heterozygous♀+/- ♂+/-Figure 3: with image from Schnur et al., 2021
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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