Genomic Feature
omf2
- ID
- ZDB-ALT-230808-5
- Name
- omf2
- Synonyms
-
- om2del8 (1)
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Varshney Lab
- Current Source
- Other Pages
-
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 7: 67436263 - 67436270 (GRCz11) (1) Details
- Nucleotide change
- TCCGGGGG/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 8 bp deleted (1)
- Transcript Consequence
- None
- Protein Consequence
- Polypeptide Truncation (1)
- Flanking Sequence
-
TATGTATGCATGTGTATCGCATATACATAATGAATATATATATAATACACACACACACACATACTATGTCACGAATAATCTTTTCCCATCACAAAAAAAACTATAAAATCAGGCCCTTTTCGTAGGCCAACAATTGAAAGGACCACATAATACAAATACAACATGCTAACTTCAGTGAACTTGTTTGTTTATTTGTGTTTTTTAGGCAAATTGTGCATGTGTTGTTAGGATTTGCAGTGTGTTTTCTACATGTGTTTGCCTTGTCAGGATTTGTCAAATCAGTGAAGATGTTTTCTTAATTAGCTTTTGTTTTCTGATTCTGACATTTCTGATGAAGTGTTTTTGTTGTTTTTTTAAGTTGCAGCACGTTACGTTTTCTCGGCCACCATAGTCTTTTCATGTTATATACTTACATGACCAGTCTTTTCTTAGAAACTACACATCAGAAGAAGCGTTTGTGCACATCAACAACAAACTGAGGCGTGGAGACATCATCGGGG
TCCGGGGG/- AACCCTGGCAAGACAAAGAAGGGCGAGTTGAGCATCATCCCAGTGGAGATGACCCTGCTGTCTCCATGTCTTCATATGCTTCCACATCTTCACTTTGGCCTGAAAGACAAGGTAAAGCTTTGTTTTTAAATCACTTTGGAAATAATATCTCTCTTTCAGACTTCTTTTTCTTTGTCTGCAACCTTTTGGGGGTGGGAGAAGCACACTTGTGTATTTTATAATATGCTGTTTAATTGCAATTCAGTAAAAATTCTTTATAGTTGTCAGTGCTAATAGCCTAGTGGTTAAGTGCGCTGACATGGAGGTGCTCACGGTGACAAAAGTTTGATTTCTGGCTCCAGGTCCTAAAATGATCCTAGTATCTGCTCTCATTACCGTTCTTTCTGTAATCTCTACTGTTCTATCCTAATAAAGGTGAAAACCCTCTGAAAATAATTAAGAAAATAGGCAAAAAAATGCATTATAGTTTAAATTTATGTAAAATGCAAGTGATTGAGTTT - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| kars1omf2/omf2 (NHGRI-1) | Homozygous | ♀+/- ♂+/- | Fig. S7 from Lin et al., 2021 | Fig. S6 from Lin et al., 2021 |
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Supplemental Information
- Genotyping protocol
- None