Genomic Feature

nfl1

ID
ZDB-ALT-230206-6
Name
nfl1
Synonyms
  • n1001 (1)
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Curtis French lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 18
Variants
Variant Type
Small Deletion
Variant Location
Chr 18: 17485214 - 17485265 (GRCz11) (1) Details
Nucleotide change
CGCGGGGATGATGCCTCCAACTTCGCCACCGTACACATAGATGAGGGAGGAA/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
52 bp deleted in Exon 1 (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
ACATTTTCCTCTTCGTTTTGAGGTTGGGTGTCGTTCGACTTCTCCTTAATATCTCTTCCAGGATTTTGCTTGAGTGGAGAGACTTTCTCTGATTGGGCACCTTGATGGAGTTTAAAGCTCGTCACCCGAGTTCTCTTGTGACCGACTTTGGTGTCACCTGTGTCCTGAGTCCGGCACTTTCTCTTCCGCCGCCGGTAGTTTCCGTTCTCAAACATGTCCAGGCATTTGGTGTCCAGCGTCCAGTAGCTGCCTTTGCCCGGTCGCCCCTTCTCTCTGGGCACTTTAATGAAACAGTCGTTGAGCGAGAGGTTATGGCGGATTGAGTTCTGCCAACCTTGTTTGTTGTCGTGATAATATGGGAAGCGGTCCATGATGAACTGATAGATCCCGCTGAGGGTCGCGCGCTTGTCCGGCGCGTTCTTGATTGCCATGGCGATGAGCGCGATGTAGCTGTACGGGGGTTTTTGTGGAGGCTCCTGCCGGCCAGACGCGAACCCCAG
CGCGGGGATGATGCCTCCAACTTCGCCACCGTACACATAGATGAGGGAGGAA/- CCGGACAGGCCGAGAGCCGAGGCAGCCACGCCGGACTGCGGCACGGGGCTGTGGTATAAACTCATGACTTCGGAGGACAGATTCAGTCTGGGGAGATCGCCACCGGTGTGTCCGCTTCATGAGTCCGAAATGTTAAATAATTGTTGTCCGTTTTGCTGTTTTATGTTGACTTAGCGCTGGAAAATAAATTGTCTATGATAAACACTCGTTGTGTTCCCTCAGCCCACCCACATTAATTAAAATTTCATTGCCGAAAGCCTCGAGTCTCTCTCTCCCTCCGCGTGTCCCCTGCCCTACCAGCCAATGGTGTGCTCGGTTATTCCTTCATTTGTTTATAGAATTAGTCTGTTGATAAGTCTGCCCACCCAAGTTGAATCAAGCTGTGTTTATTTGGAAAAATTTCCGGGCACCCAATACATAAACGCACTGATCTGATGTTTGAAATATCACGTCCACCCTTAACGCTGAAAGTTGCTCGCACAGAGAGAACAAGCAAACAT
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
foxl1nfl1/nfl1 (AB)Homozygous♀+/- ♂+/-5 figures with image from Hawkey-Noble et al., 2022Figure 7 with image from Hawkey-Noble et al., 2022
foxc1aua1017/ua1017; foxl1nfl1/nfl1 (AB)Complex2 figures with image from Hawkey-Noble et al., 2022
foxc1bua1018/ua1018; foxl1nfl1/nfl1 (AB)Complex2 figures with image from Hawkey-Noble et al., 2022
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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