Genomic Feature

gib005

ID
ZDB-ALT-221129-7
Name
gib005
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Sivasubbu Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 7
Variants
Variant Type
Small Deletion
Variant Location
Chr 7: 67732156 - 67732163 (GRCz11) (1) Details
Nucleotide change
GAGCATGC/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
8 bp deleted (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
AAATACATTTTTTGGGGGCTGAACCAGGCCTTTAAATCATTCAACTAGCTTAAATTGAGCAGATTTTCTCATAAAGATAAATTCACTCACCTGCGGTCACATTAAAGTCAATCCATCTTCAACCAGAACGGTGGCCAAATCATGGAGGTCATCTAACTTAGTTCTCAAAAGAACCCAGACTTATCTGCTCCAACATCTTCAGGTGTATCCCAAGGAGAGCTCAGTCCCTCCAATGTGGACTTTCCTCCTGGTAGGACAATCCCAGAACACCTCCACACACAGTTATCCAAAAACAGATGCCCAAGCCATATTAACAGTCATATTTCAGTGTGGAGGAACATCGTCTTTACTCCAAACAGCTTCCAGGTCACACAGCAGTTTTTCATATAGAGTACAAAGATTGACCGGTAAATCAAAAGTATTTCCTTTCAGCTCTCGTTGACCTTTACTAAAACATATCTGCTAACTTCCATTCGTCCACATGTGTAACTGCCCAAACC
GAGCATGC/- TTCATATGGGGTTTCCTAATGAGCCCGTTGCAGCTGAAGGCAATACCATTTCCCTGGACAGATATCAGTGGAGTACACATGGCACTCGTTGCTAGCTGATTAGATATGCAAATGACGGGGAGCTGCTCTCAGCACTCTGTAGAAGTCATTAGCAAATGTTTTATTCAGCGAAGACTTTGTTGAGTAGTTAGCTCAGACATTGAACATTTGAGAATAATAATAAAAGTTCAAGTCAATTCAAGTTTATTTCTAGCTCTTTTCTAATGGGACTGTGCGTTTAATAATAGACTGTAGTGCTTTGTGTCCCCATTAGTAATCACTAAATGGAACCACTAAAAGTGAATTGTATAGTTTACTTGCTACTGCATTTATTTATTTATTTTTGTTATTCGAAGTTGTGCTTGTTAAGACTATTCCCTCATAGCAAAATATTTCTGGCCCATACAATCAGCTTTTGCCTGGCCCACATGCAGTGAATTACTGTACATGACTGGACCAAG
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
lnc.veal2gib005/+HeterozygousUnknownFig. 4 with image from Sehgal et al., 2021
lnc.veal2gib005/gib005; sd2Tg/sd2Tg; y1Tg/y1TgComplex
lnc.veal2gib005/+; sd2Tg/sd2Tg; y1Tg/y1TgComplex2 figures with image from Sehgal et al., 2021Fig. 2 with image from Sehgal et al., 2021
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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