Genomic Feature
ci1013
- ID
- ZDB-ALT-220310-1
- Name
- ci1013
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Waxman Lab
- Current Source
- Other Pages
-
Notes
| Comment | Citation |
|---|---|
| Fish carrying this allele are homozygous viable. Homozygous males are largely ... | Falkenberg et al., 2021 |
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 24: 17273531 - 17273574 (GRCz11) (1) Details
- Nucleotide change
- CATCTCCCTGGAGGAGTTCGATCCTGGGGTCAAAGAGGCTGCTG/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 44 bp deleted from position 17273531 to 17273574 in Exon 4 (1)
- Transcript Consequence
- Premature Stop (1)
- Protein Consequence
- Polypeptide Truncation (1)
- Flanking Sequence
-
TTGGCTGTGTTTTGGATAATTGTCTTGCTGTAATATCCACCCTGGCTTCATCATCTTGTTAATGTAGAGGTCAGCTTGAAGCAGCTGTAATAATTTACAATGATAAAGGTTAGATGGTTGCTGAATAACTACTAAGAGATTTCAGCTGCTGTCTGGGCATTCACTAATTTGGTGAATTGAATTGAATTAATTTCTACATCTTCTTTTCTTCATGTGTTCAATACTTTTTCCCAGTGTCCTAAGTTTTTCTCAGAGGATGAAAAAAATAAAACCTTGATAAATTCTATAAATATCTAAAGCTGCATTTCAGGACTGCTTGTCATTCCTTTCTTAAGTGTAATTAATATATGATTGCTTTGTCCATTCCCCTATGAATATATGGGATATGAAAGACAGCGATTCTATAAGAAAGCTGCTGCATTCGTTCTTCGGGCTGTTGCTAAGCATTCCCCCGAGCTGGCCCAGGCTGTGGTGGACTGTGGAGCAGTGGACGCTCTTGT
CATCTCCCTGGAGGAGTTCGATCCTGGGGTCAAAGAGGCTGCTG/- CATGGGCTATAGGCAACATCGCCAGACATAATGGCCGTAAGTGTAAAGCTAAAAGGGTTTTTTAATGTTTACGGTAATGTTGCCCTAGCTGTTCATCTTTTCTCTCCTGGTGTGCAGAGCTGTCTCAGGCAGTGGTTGATGCTGGAGTTGTGCCTCTGCTCGTGTTATGCATCCAGGAACCTGAAATAGCCCTGAAGAGAGTTGCTGCTTCTGCTCTGAGCGATATAGCCAAACATTCTCCAGAGCTGGCTCAAACTGTGGTGGACACAGGGGCAATCGCACACCTTGCACAGATGATCCTAAACCCAGATGCCAAATTGAAGGTCACAAAGCCTACAGATATTATAATCAATGACTCGCAAAGGGATAGTTCAGCCAAAAATGAAAATCTGTCATTGTTTACTCATCCTTTACTTGATTCAAACCTTAATGAGTTTCTTTCTTATGTTCAACACAAATAGTGAGTTTAATTTCATTTTTGGGTGAACTATATTGTTAAT - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None