Genomic Feature

zf3395

ID
ZDB-ALT-220228-9
Name
zf3395
Synonyms
  • sny R8 delta 60 (1)
Affected Genomic Region
Construct
None
Type
Allele with one delins (1)
Protocol
embryos treated with
Lab of Origin
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 14
Variants
Variant Type
Delins
Variant Location
Chr 14: 25040135 - 25040301 (GRCz11) (1) Details
Nucleotide change
GGGTAAGGGAGTATCACTCCTACAAATGTCAGAGCAAACAGTGATTACTTGACAAATAAAATCACAAATTTTCAGAATATTTCAAGAGGCCATACATCACCTTTGTAAATGAACATAAGAATCTCAGCAACGAAAAATGCAGCAAAATACCAGCCGTTCAAATGAAA/AAGGGAGTATGAATATTTCAAGAGGCCATACATCACCTTTGTAAATGAGGATCTG
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
55 bp inserted / 167 bp deleted (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
TTACACAGTTACGTCAAATTCCTGTTCTCTATAGACAAGTTATTGTGTTTATAGTTTTATATAGTATCTCAAATCGTCTAGACATTTACATATTATTCAATAATCCCAAAGAAGATAACATAAAAACTGTAACAAAACACGTTTGAGTAAGTTAATTAATTGACGGAATGATCAGCTCAAAAATCTGTAGCACTTTTCAAAAAACATTTTTATAAAGTCCTATGGGGAAGAAAAAAACACTTCTAGAACTAGCACTGCTGAAGAAGCAGGCCCGACTAATGCACACTTTATTTATTGCTAAATTTTGAGCATCGTCAAACACTGCTTCACAAGGTCTTCTGAAGTTCTGACTGAGCATAATTTCAGTGCACTAACTGAACGATTCTACAAACTAAAGCAGATTAAACAACTTTATAAGGCACTGACCATAGAAAAGTCTGAGTGTTTCAAGGCCAGAGAAGAGGAGCAGCAGGACAACATCCAATATCAGATTATCTTGT
GGGTAAGGGAGTATCACTCCTACAAATGTCAGAGCAAACAGTGATTACTTGACAAATAAAATCACAAATTTTCAGAATATTTCAAGAGGCCATACATCACCTTTGTAAATGAACATAAGAATCTCAGCAACGAAAAATGCAGCAAAATACCAGCCGTTCAAATGAAA/AAGGGAGTATGAATATTTCAAGAGGCCATACATCACCTTTGTAAATGAGGATCTG CAGGATCTGCAGTGGTGTGGACGACAACTGAGGTACTTTGTTAAGAAGCAATATCAACAGAATAAACAAAGACAAACGAGTAAATAATAAGAAAAAAAAACAGCTTGAAAAGATACAACAGGTTGTCTTCCTGCAAAAGTGAAAATAAATACTGAATTAGTGAAAATAACATAGGTCTAAAAGTAAAAGTCCTTTAGTCTCATTTATGCATCTGCCATCTTGGAATGGGTAATGCAGTTTTTCAAGATGCCACAATATTGTGCAGTCTCTACTTGTAGAAGAAAAGGGGGGCACTGCCACTGACATTTTTATAACCAAAGATAGTGTAAATATAGATAGCATAAATCTTTCACAGGTGAGAATGTGCTGGTTTGTGAATTTGTATGCATTCATTCAATATTACAGTCAGTTTGCCTATCAGAGTTCACAAACCAGCTTCCTATATTGCACATGGCATGCATATACAATGCTGTTTTGGGTCAGTGGCTCATTTTCTTCCT
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
tmem216zf3395/zf3395 (AB/TU)Homozygous♀+/- ♂+/-3 figures with image from Liu et al., 2020
tmem216zf3395/+ (AB/TU)Heterozygous♀+/- ♂+/-Table 1 from Liu et al., 2020
1 - 2 of 2
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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