Genomic Feature

uwm49

ID
ZDB-ALT-220214-9
Name
uwm49
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Huttenlocher Lab
Current Source
Zebrafish International Resource Center (ZIRC)    ( order this )
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 22
Variants
Variant Type
Small Deletion
Variant Location
Chr 22: 5140975 - 5140986 (GRCz11) (1) Details
Nucleotide change
TGGACAGAGGGA/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
12 bp deleted in Exon 5 (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
ACATTTCATCAAGCATGAATATTGAAAAGATAGCTGTTTTATTTGTGTGTGTGGAAAAAATGAACAGGTTTTTTTTTTTCTTGAAGAGCTTCTTTAAAATTTACCGTCAGTCGTGACATTGACATTTGCCGCAGATCAAATCCTTAATTCAGATTCCTAACGCTCGTCGCTCTCGGATCAAAAGCCGTCAGCTCCTTTTATTTTTTGTACAGGTGTTGCATATCAGTACTTTATGAAAACGTCTTCATCTTCAGATTGCATTGAATTTCTCGGTTGCAGGATGGTGACGGTGACGTCCTGGTGGCCTTGTCCCCCGGTGTAAATAAGAAAAAGTTCAAAAGCACGTATGAAACGCGCGCGCCGTTCGCTCATGTCTCCTTTTGTTATTCTTAGTCAGGATCTCTTTGTTATTCAGCCCACTCCTCCAGGCTTTCTCTGTTAATGTCTTGTGTCGCTCATCCTCTCTATTTCTTTTCTTCTCAGTCCCAGACGGCCGTGGG
TGGACAGAGGGA/- TGTTGCTTTGAAAGAAGAAGAGTACATAGTGTCAGAGTCTGCAGGTGAGCATGCGTATATGCTATTCCAAAACCTAGAGTCAATTTTAAGGCCATTTTATTAGAGATCACACGGTATTCATGTTTCATAACGCGATTATGGTGACCAAAATTATAAGGGCTATCATTATTACAGTTTTGTTAAAATGAGCTAAAAATGTCTTACAAAACACACATATTCCCACAAGTTTTTTTACATCTGGAGATGAACTAATAACACAATTATTCATTCATTTTCTTGTCGGCTTAGTCCCTTTATTAATCCTGGGTCGCCACAGCGGAATGAACCGCCAACTTATCTAGCAAGTTTTTACGCAGCGAATGCCCTTCCAGCCACAACCCATCTCTGGGAAACATCCACACACTCATTCACACACACACTCATACACTACGGACAATTTAGCCTACCCAATTCCCCTGTACCGCATGTCTTTGGACTGTGGAGCACCCTGAGGAAACCCA
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
mydgfuwm49/uwm49HomozygousUnknown2 figures from Houseright et al., 2021Fig. 5 from Houseright et al., 2021
mydgfuwm49/+ (AB)Heterozygous♀+/- ♂+/-
mydgfuwm49/uwm49; uwm4Tg/uwm4TgComplexFig. 4 from Houseright et al., 2021
mydgfuwm49/uwm49; uwm7Tg/uwm7TgComplex2 figures from Houseright et al., 2021
mydgfuwm49/uwm49 + MO1-arntComplex
mydgfuwm49/uwm49; uwm7Tg/uwm7Tg + MO1-arntComplexFig. 5 from Houseright et al., 2021
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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