Genomic Feature

phk1

ID
ZDB-ALT-211118-1
Name
phk1
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one delins (1)
Protocol
embryos treated with
Lab of Origin
Alvin Ma Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 1
Variants
Variant Type
Delins
Variant Location
Chr 1: 55229791 - 55229793 (GRCz11) (1) Details
Nucleotide change
GGA/AAAAACGCCG
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
10 bp inserted / 3 bp deleted (1)
Transcript Consequence
Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
TTAATCCTCTTTAACATATCCCTAATCAGTCCCTCAGAGATTTTCCGTCAAAATCACAAGCAAAACTCAACAATTAAAGCAGAAAATGCGAGAAGTTTTCATCATTGCGCAAAATTCTGCTAATTCCCAAACCTTAGTGATGTCAACAGGAAGTCCTCCTTTGGCAGCAGTGATCATGGGGTCCAGGCCTTTAGCATTCCTCAGGTGCTGAGCGGCTCCTTGCATGTCCTTCATCTCCTTTGAGCGCAGAGCCGCCTTTATAAACTGCTGCCTGCGCATCGTCAGGAAATCCAGCTGCTGCTGAGCTACAAAACACGCGCACACACATTATCTGGATTATTAATTACAGTATTTTGAACACTGACATTGCAGGAATTGTACATAATCATGAACTGTAGTCGGATTACAAGTATTTTAGAAACGAGTTTAGTGTAATTAAAAGTAATCCAGATAAACACACATACAAATCTACCTTTTCCTCCCATTTTAGGAGTGTTTGT
GGA/AAAAACGCCG TCCAGTCGGCGTTCCCGCGGTGGACGAGGCTTTCGGAGGAGCTGGAGCTCTGGATTTCTGAACAGCAGGTTGAGCTGAAGGCTACACACAAACAGAAGAATGATTAACTGATTTAATTAATCAATTTATTATATAATTTATATATATATATATATATATACATACATATAAGTTATATATATATATATATATATATATATATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAACCACCTGTAAAATGCAGCTTGTATGAGCCATGATGTTTACCTTCTGTGGCTCCTCCTCCTCTGCATCTGCATCCTGATTGGCCAGTTTGACAGCGTTCTCTAGGACACCCATAAGGTTCTGATCGCCACTTTCAGCCCCCTGCAGCGGAGGACAACCTGACCCACACACACACACACAGACACAACACCACAT
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
cc2d1aphk1/phk1Homozygous♀+/- ♂+/-Fig. S5 from Ma et al., 2020
cc2d1aphk1/+Heterozygous♀+/- ♂+/-Fig. 5 from Ma et al., 2020
1 - 2 of 2
Show
Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
Show
Your Input Welcome
We welcome your input and comments. Please use this form to recommend updates to the information in ZFIN. We appreciate as much detail as possible and references as appropriate. We will review your comments promptly.