Genomic Feature

uq4ks

ID
ZDB-ALT-211020-3
Name
uq4ks
Synonyms
  • grime (1)
Affected Genomic Region
Construct
None
Type
Allele with one point mutation (1)
Protocol
Lab of Origin
Kelly Smith Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 5
Variants
Variant Type
Point Mutation
Variant Location
Chr 5: 48029892 (GRCz11) (1) Details
Nucleotide change
A/T
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
T>A in Exon 12 (1)
Transcript Consequence
Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
CTCTCCCAGCTTGACTAAAAACACTGTTTTGACTTCACATACCAACAATGAAAACCTCTCGTACAGCAGAACCCAGTATCTACTTAAGAGAAGTATAATAACAAAAAAAAAAAAAATGCTATTAAAAATCGTCGTTCTTATGAAATTCATTAAAAATAAAATGAAGTACATCAAAGACCATGAGTGATCCCTTCCTTCCAACCTTCTAGTGGCTCATAAAAAAGTCAGCATTTCAAGGTCTCCTTCAGTTGGCATCCCCTGTTCGTTGATGCATTGATGAATATTACAGTGAGTGAATTATGACTGTTGTCGTTTGTGAATTTGTTAGTTTAAAACAATGCGGAAGTCCTTCAGAGAAGAACCCGACTGATATGGTTGTAGGAAAGGGGAATGTTTGAGTGCCTCGTGCTGCAAAGTTCAGTCGAAACAAGCCCTTAAAGATGCTATGCAGCCATCAGATACTGGTGGTAGAAAAGGCCGAAGAGAGAGGTGGAGAACAA
A/T CACGCGGCGATCCACCAAGTGAAGAAAGACAGAAGCCCTCGAAAAAGCAAGGGGGAGAAAACAGTCCTCAGCCCCCCAAGTGCAACCGACAGCTGGGCCACAGTTTGAGAGGCCTCCATCTGGCTTTGCCCCACCTCGGCAGGGCTAGAGTCCTCGTTTGATAGACACGGCAAACTCTCATCAGAGTAAATCACCCACGAGTGTCCACCTGGGGGTTGAAAGAGGAGTCTGAAAATTTCAAGAAACCCAACGGGGCTGATAGAGATTGTGTCAAGAAGAACTTCAATGCACTTACCTAATGTCTTTAGCAGCAAAGTAGTGTGTAACAGCATCACCAGAGGCGCAATGTACTGTAGAGCTATTACACACAGGTAGTAAAAGACTCGGGCCACCTGTGTGAGGGAAAACAAATTTGCAGTTAAAACACTTAGGCAAATTTTGTTCAAAACAAGCAGCTTGGCAGGAGAGGAGCTCATCAAACAGACTTGCTGAAACCATCA
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
tmem161buq4ks/uq4ksHomozygous♀+/- ♂+/-3 figures with image from Koopman et al., 2021
tmem161buq4ks/+Heterozygous♀+/- ♂+/-Fig. 6 with image from Koopman et al., 2021
tmem161buq4ks/+; tmem161buq5ks/+ComplexFig. 2 with image from Koopman et al., 2021
tmem161buq4ks/uq4ks; ccu1Tg; hu6531TgComplexFig. 7 with image from Koopman et al., 2021
tmem161buq4ks/uq4ks; hu11688TgComplexFig. 5 with image from Koopman et al., 2021
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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