Genomic Feature

bsl456

ID
ZDB-ALT-211004-1
Name
bsl456
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Hammond Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 11
Variants
Variant Type
Small Deletion
Variant Location
Chr 11: 18678416 - 18678420 (GRCz11) (1) Details
Nucleotide change
TACGA/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
in Exon 10 (1)
Transcript Consequence
Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
TTCTTTTTTCTCATTTAACTTTTGTCTTGATTTACTTTCCCACAGGGAGCAAAACGGATACAGACCCAACCAGGGTGGTGTAATGCGATCAGTTATGGGTAATGCCAATCCGAATGCTCAGATGGGCATGGGCAACACTAGGGGCTACGGCATGAATGAGCAAGGCCACATGGGACCCAGAGGCGGAGCAATGTATGGCCCGGGAAACAGGATGAATCAGATGAACCCGATGCACCAGATGAATCAAATGAACCAGATGAATTCGATGAATCAAATGAATATGAATCAGATGAATTGCATGAATCAAATGGGCTCAATGAATCAGATGAATCAAATGAATCAAATGAACTCTATGAATCAGATGGGCCATCCTGGGATGAATCAGCACCAGCAGGGCCAGTTTCATGGTGGTGGCGGCTATGGAATGGTAATGACAAGTCCCTCTCAAGGAAGTCCGGGAATGAATCCTGGTCAGCAGAATCTCATGGGGTCTCCGCGGA
TACGA/- GGGAGTCCTAAAATGGGAGCAAGTCCATTTTCACCTGGAGGTATGTTTACTGTTTTTGGAGTTTAGATTAGATGGGTGCAATCTTGTGAAATGCAGTATGTGATTGTACTAGAGAAGGCAAATATTGTCAAATTTCTGCAAAACAATTCCTAAAATTTGACGAATGACAAAAATACTGACCACTTTAAAATACTGTAGCAGTTATTTAGTGTTAGTTTTTTTGTATTGCTTATATTTTATATGAGTTTATGAATTTGATATGATTTGTAATGACTCACATTTTTCTATTTATGCGTACCTAAAACATTTAAATCAAATTTTCAACAAAAAAAGATTGTTTAAAATTCGTGTAATATCAAAATTTCCTATGATTATTTTGTAGCTCACATTATTCTTGAGGTACACAGTTAATTCGTGTATGGTAATATAATTAAAAATGTATATATTTTGGTAATCAAAGTCTTACCAATCAAAGTCTGACCATTTGCTTCCGCGTTTGA
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
ncoa3bsl456/bsl456; hu5910TgComplex2 figures from da Silva et al., 2020
ncoa3bsl456/bsl456; hu5910Tg; um14TgComplex4 figures with image from da Silva et al., 2020Figure 3 with image from da Silva et al., 2020
1 - 2 of 2
Show
Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
Show
Your Input Welcome
We welcome your input and comments. Please use this form to recommend updates to the information in ZFIN. We appreciate as much detail as possible and references as appropriate. We will review your comments promptly.