Genomic Feature

bns329

ID
ZDB-ALT-210422-7
Name
bns329
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one delins (1)
Protocol
embryos treated with
Lab of Origin
Stainier Lab
Current Source
Other Pages
Notes
Comment Citation
This line contains a 2 bp insertion ad a 6 bp deletion. Boezio et al., 2020
Genome Browser
Genome Build: GRCz11Chromosome: 2
Variants
Variant Type
Delins
Variant Location
Chr 2: 23890140 - 23890145 (GRCz11) (1) Details
Nucleotide change
GGGTAA/TC
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
2 bp inserted / 6 bp deleted (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
GAGCCAAGCACTCATGTCCATACCAATTTCATCATTGTAGAAAGTGAAAAGCAAGAGAACTGCATATTCATTATTAAACCTCCCTATCTGTGACGTGAAAGCCAAGGTTTTCCGAATACTGCAGGACACAATTCACCTTTAATATATAAAAGAGGCATGGAAATGTATTGGTAGAATACATCTTGCATCTGGGAGCTCAAGGTTACCACAAAAAAAAAAAAAAACGACTCAAAGCTGATGTAGAGCCAAATGAAATAAAAGATTTGGATAGCAAAGTAAAAAACAAAAGAAAGCTCTACATGTGTCACAATATACTCTATAACCTTAAAACACAAACTCAGGCATTGCAAACACACAAAACAAGCCCACTCCATGTTCATCATGAGTATATTATTTGCTCACCTGGGATAACTTTTGGGTTCTTGTTGCACATGTGAGTGTTGCAGCAGTACGGATGCTTCCCGTTGTTGGAAGGAGCGCACTGGAAAGGCCTGTCCCGG
GGGTAA/TC AGATCATCCTGCTGAATACACTGATGCTCCTGTGTCACGGTCTGTCCAGAAGACTTAGCGATGACGGCAAAACACAGTCCAGTTGTGTTGCACGACCGATTGACACATCGTTCACAGTAACACAGCAGTCCTGATTCAGAAAAAAACATAGAAAGAGACTTTAGATTAGGAAACATTTAGATGGTCGGCTTATTCAACAGCACAATCATTGTCCCAAACAGATTCACCAGTGTTTTCTGCACGGTGGGGGGCGTGGCATGGCCCGGCTGTTCAAATAGACACCGACATAAGGAATCATGGTTGTTAACTTGTTTCTTTTCATGACAGCAGTAAAAATACTGAGCAATTATTTGAACTGTACAACCGTACAAGCAAAAAAAATGTGTAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTAGGGCTGTAACGATACACCAAACCCACGATTCGGTTCGTATCACGA
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
tgfbr1abns329/bns329; s843TgComplex6 figures with image from Bensimon-Brito et al., 2021
tgfbr1abns329/bns329; tgfbr1bbns225/bns225ComplexFigure 4. with image from Boezio et al., 2020Figure 6 with image from Boezio et al., 2020
tgfbr1abns329/bns329; tgfbr1bbns225/bns225; bns421TgComplexFigure 5 with image from Boezio et al., 2020
tgfbr1abns329/bns329; tgfbr1bbns225/bns225; bns421Tg; s843TgComplexFigure 5 with image from Boezio et al., 2020
tgfbr1abns329/bns329; tgfbr1bbns225/bns225; mu293Tg; ncv22TgComplexFigure 4. with image from Boezio et al., 2020Figure 4. with image from Boezio et al., 2020
tgfbr1abns329/bns329; tgfbr1bbns225/bns225; ncv22TgComplex
tgfbr1abns329/bns329; tgfbr1bbns225/bns225; pd27TgComplexFigure 1 with image from Boezio et al., 2020
tgfbr1abns329/bns329; tgfbr1bbns225/bns225; pd27Tg; zf3194TgComplex
tgfbr1abns329/bns329; tgfbr1bbns225/bns225; s843TgComplex3 figures with image from Boezio et al., 20204 figures with image from Boezio et al., 2020
tgfbr1abns329/+; tgfbr1bbns225/+; s843TgComplexFigure 2 with image from Boezio et al., 2020
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 2 of 2
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