Genomic Feature

m1355

ID
ZDB-ALT-210322-14
Name
m1355
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Driever Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 17
Variants
Variant Type
Small Deletion
Variant Location
Chr 17: 38262804 - 38262811 (GRCz11) (1) Details
Nucleotide change
ACAGCCAT/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
8 bp deleted (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
GTGCACAGATGATAGCGCTGCTTTGTATTGTTGCCCTGGCTGCTGATGCCCCGCCTCTGATGGAAGCCTTAAACCTGGCACCAAGCTAAAACAAACGAAAGTCAGCTTCGAGCTCCCACTCAAACCAATTAAGGCGGACTCCAGTGCGCACTCATACGTTTCCATCCTGCTGCAGCGACGGTGAAACAACAGGAACAGAGGAGCTGGCCAAAAAAAGAAGGAGAGATTGCCTTGCCTTCTAATTTCTCCCTTTCCAACACAGAACAATGTCGATGAGCCCTAAGCATACGACTCCTTTTTCTGTATCCGATATCTTAAGTCCTCTTGAAGAGAGCTACAAAAAAGTGAGTATGGAGGGGAACAACTTGGGGGCTCCTCTTGCCTCGTACAGACAACCCCAAGTCACGCAAGCGGCGATGCAGCAGCACCACATGGGCCACAATGGAACAGTACCCGCTGCCTACCACATGACTGCAGCTGGAGTTTCCCAGCTGTCACAT
ACAGCCAT/- GGGGGGCTACTGTAACGGGAATTTGGGCAACATGAGCGACCTGCCGGCCTATCAAGACGGGATGAGAGGCAGCACGACGGCCACCAGCTGGTACGGAACGAATCCTGACCCACGCTTCTCTACAAGTACGTGAGATTAACACTTTACGTTGTGTTTGCAAGAGCTGCTTGTGCATTTTGAGAGGTGTTTTGCAATGCGTATTAATCTGTTTTAATTGTGACTGTAGCCGGTTGTATTTATCATGTATTATTCTGTTTTAAAATGTTCTAATTTTACACCAAATTAGAGCGCATGGGGCTTTGCCGGCGTTGCTAAACGTTACACGTGCCAGGTGTTGTATCTAAACCCAAACGAACTGCATAAATTAACTCTCCAGTTACAGTTGACAGACAACACAATAATAATGCACAATATTTGTTTATTTGCTGTCCTTTTATAACTCACACAGCGATTTAATCTCTCCGTACTCGTTATTAATTGATTGATTGTGTTTATTGTGA
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
nkx2.1m1355/m1355; nkx2.4am1354/m1354ComplexFIGURE 1 with image from Schredelseker et al., 2020
nkx2.1m1355/m1355; nkx2.4am1354/m1354; nkx2.4bm1353/m1353ComplexFIGURE 1 with image from Schredelseker et al., 2020
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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