Genomic Feature

ucl1

ID
ZDB-ALT-210205-1
Name
ucl1
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one delins (1)
Protocol
embryos treated with
Lab of Origin
Escribano Martínez Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 15
Variants
Variant Type
Delins
Variant Location
Chr 15: 2903312 - 2903336 (GRCz11) (1) Details
Nucleotide change
TCCACGTAGCTGCTGGCCTCCTCCG/ACCTGGACCTGGACCTGGCCTCCTCCGCC
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
29 bp inserted / 25 bp deleted in Exon 1 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
GACTGGTCAAGCTGGTTTTAGCTGGATTTGGCTGGTCATTTTCCAGCCTGACCAGCTAAGATCAGGCTGGAAATGGCTCCAGCCTGACCAGCTAAGACCAGGTTGGAAATGGCTGGAGACCAGCCTGGAAGTGGCCAAAACCCCTCTAAAACCAGGCTGGTCGACCAGCTAAAACCAGCTAACCAGCCTAGGCTGGTTTAAGCTGGATTTTTCAGTAGGGAAGGCACACCAACAGCATACATTTTTAACCTTTCCCTAATCAAACACACCTGAATCAACTCATCAGAACATTAGTGGAGCTCTAAAACCTGAAATGAATGGGTCAGATAAGGGAGACATCCTCAGTATGTGCTGTTGGTGTACCTCTAGAAACAAGGTAGGGAAACACTCATCAAGAAAATGCTTCTTGATTTAAGAATTTGAAGATGTTTAGACTCTAAAACTCATTTATTGCGCGTGTTTGACTCACCCCGTCCATGTCAAACGTGAAGAAGACCTGG
TCCACGTAGCTGCTGGCCTCCTCCG/ACCTGGACCTGGACCTGGCCTCCTCCGCC TCATGCCCTGCATCTCCAGCATGTTTTTGAGCTCGAACAGCGTAATCAAGCCTGACGGAGATTCCCTCATGAACTTGTTGTACCAGTAGTGCATGTCCTCAGCCAAGACCTCATCCAGGTTGGATGCGTGGGCGCCCATAACTCCTCCGAAGCCTTTCTTTCTGGATGAAGTAAGCGGTTGGTCAAATCCAGAAGCCCAGCAGTGGCTTCAGTGGACAGAGAGCGAGATGTGAAGAGTCTGCCGCTGCGATCTGGGATTGACTGCTGATGACGGCAGGAAGCTTAATGCCCTACAGACTAGGCAACTAAAAGGAGAGATAACCCCTTAATTGGATAACTCCTCAACCCTTCCAGGAACCAGAGAACATTCATGGCTGGCAGACAGGGGAAAGTGGAAAGTCTCCAAACGGATTGAGCTCTCTCTTTTTATTTTCTCTCAGTAAAGGAGAGATGATGATTTGTCGTAATCCTGAACTTCCTGACTTTCTCTTTCTGTGTGT
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
guca1cucl1/ucl1 (AB)Homozygous♀+/- ♂+/-4 figures from Morales-Cámara et al., 20202 figures from Morales-Cámara et al., 2020
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Supplemental Information
Genotyping protocol
None
Citations
TSV
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