Genomic Feature

ecu11

ID
ZDB-ALT-210120-6
Name
ecu11
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one insertion (1)
Protocol
embryos treated with
Lab of Origin
Yong Zhu Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 19
Variants
Variant Type
Insertion
Variant Location
Chr 19: 13962399 - 13962400 (GRCz11) (1) Details
Nucleotide change
-/ATATGGATATGATA
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
14 bp inserted in Exon 1 (1)
Transcript Consequence
None
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
CATAACAGCAGCCGAAGCAAGACAGACAACACAAAAAGCTAGCAATAGGCATGAAACATCCTCGCACGCTTTCATGCCAACTTTCCTCAATAGCATAGTAGTAGTGCACCACTGCGCTTCCGTATTGATACAGCGCAACACCAACATAATCGAGGAAAAAAAAAGCATAATGGTGGAACACTGATTTGGCTGCCAACAGGTGAGCCACAGTGCTAAAACCCATGTAAGCCATTGATGTCAAGAGAAGGATAAGAAGTGGCCAGGAATGAGCATCATTTATGAAATCTACAGTCTCAGCTAATTGGACAGCTCTCAAAAGCACCACTAGTGCTCCCAGTAGGTGCGTCCAAACATTTATGGATTCGTTGTGCCATTGGAAGAGCGACAGGAAGTAGTAGCGCCACTTCTGGTGGACTGCGCGGTAGCCAGAGTGAATGTAGTGTTTGCGGAAAAAACAAGGTGCCTCTTTGTCGCTCAAGGTCTTGGGCATTGATGATATGG
-/ATATGGATATGATA TCTCGGAGAGCATCTGAGGAATTTGCATCATCTTCTGCAGGTTAAAGAATAACCGGCCAATCTTTTTCATAAATTTTGTAGTCACGGTGATCTCTTGAAGTTTGCATGCAAGTTAATCCAGGCCTAAACTGAGGACAGGCTTGTATGTCTGGGAAATCAATAAAAATGTCATATGTGAGTTAGGATTTGTTTACATCTGGTGTTAAGATTTGTGGATCTGGTTACAATTAGATGACAGTAAACAGGAGCTGAAAGCTAAAATTATATATTATTATTTTCCACTTGTCCAAATCTGTTTGATTTTCTTTATTTTGTTGAACACAAAAGACTAAAGAATGTTGCAAAAAAAAAAAAAAAAAGCAGCCATTGACTTCTGTATTTTTTGTTTTAACCTCCTAGGGCTTAGTGGCCACATACGTGGACAGCAAATTTTAGCTCTTAATATTTAAAATACTTTGAATGTTTATATTTTGTTACAGACAGACAGTGTCATCATGCAAC
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
paqr7aecu11/ecu11 (TU)Homozygous♀+/- ♂+/-Fig. 1 from Wu et al., 2020
paqr5aecu14/ecu14; paqr5becu15/ecu15; paqr6ecu16/ecu16; paqr7becu12/ecu12; paqr8ecu13/ecu13; paqr9ecu17/ecu17; paqr7aecu11/ecu11 (TU)Complex4 figures with image from Wu et al., 2020text only from Wu et al., 2020
paqr5aecu14; paqr5becu15; paqr6ecu16; paqr7becu12; paqr8ecu13; paqr9ecu17; paqr7aecu11 (TU)ComplexFig. 6 with image from Wu et al., 2020
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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