Genomic Feature

uot11

ID
ZDB-ALT-201221-12
Name
uot11
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Bruce Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 16
Variants
Variant Type
Small Deletion
Variant Location
Chr 16: 46709707 - 46709724 (GRCz11) (1) Details
Nucleotide change
GATTGGAGCGGTACCGCG/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
18 bp deleted in Exon 2 (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
GAAATAGCTAATCAGAGGTGACTGTAACTCAGAAGACACTAAATATACCTCAAAACAATGAAACTTAAATGAGTGTTATTAATAAATTAGGTGTAATTTAAATAAATGCATATCTTTAATTAACTGAATCATGTTCTACACAATCTAAGATTACAGAAAAAAAGTCTATCGTCAATGTATAATTCGCACCCTGCTTCTGTGGCTTTATGGTTTCATTCAATTTAGGAAACGAACCGGACATTCACGGTCACTGTCCCCGGATAAAATCCTTGAAGTCAAGTCTTGTAGCATATTCATAATGTATGACTCGTATCCACCTCTGTATTTGTTTGCAGTGGTTCTTATTGGAGAATCCGGTGTTGGCAAAAGCAACTTGCTGTCACGGTTCACCAAGAACGAGTTTAGCCACGACAGCCGGACGACCATCGGCGTGGAGTTCAGCACTAGAACTGTGCAGCTGAACGGACTCACTATTAAAGCTCAGATCTGGGACACCGCTG
GATTGGAGCGGTACCGCG/- CCATCACCTCTGCGTGAGTTTGACTCCATTAAAGACCTGTTAAAGGGATAGTTTACCCAAAAAATTCAAAATTACTCACTACCAGTGTTGTGCAAAATACTTCCAAACTGTAATGCGTTCCAGATTACTTGTTACTGTTATTTAAAAGTAATCCCTTAACTTACAATATTACGGTCACAGAATTTTAATGTTACATCACTCTTATATTACTTTTTAGTTACTTTCACCAAAATAACTACAGAATTAGAACTCAACATTCTAAAATGACTAAATGTACTGCAGAGCATTTTACATCCAGTAGAAAATGATTTATGTATAATAATTGATTTACATCGACCAGCGATTGGTGGCGCAAACCCAGCGTCAGCGGCCAACATCATCAACACGAAATGTGGATCCTCCAATGCTATTCGTACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
rab25buot11/uot11Homozygous♀-/- ♂-/-11 figures with image from Willoughby et al., 2021Figure 2—figure supplement 1. with image from Willoughby et al., 2021
rab25buot11/uot11; uot16TgComplexFigure 2—figure supplement 1. with image from Willoughby et al., 2021
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Supplemental Information
Genotyping protocol
None
Citations
TSV
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