Genomic Feature
iim17
- ID
- ZDB-ALT-201022-6
- Name
- iim17
- Synonyms
-
- iim02 (1)
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one delins (1)
- Protocol
- embryos treated with
- Lab of Origin
- Rotllant Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Delins
- Variant Location
- Chr 18: 31227150 - 31227156 (GRCz11) (1) Details
- Nucleotide change
- ACCACAT/TCCACCACACC
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 11 bp inserted / 7 bp deleted (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
GGATGAGGTGGAGGAAGAACGGTCCCCAGCAGAGGATGAAAACTCCAAGCAGGATAGTCAGAGTGATGGCTCCCTTCATGCTAGTGGTCTGCCGACGGCTCTTATGGAGAGCCGTGATGCGTCTTGAGTGGACATGGGCCAAGATGAACATGTGCAGGTACAGAACCGCCGTGAACACCAACGTCACGCCGAAAAAAGTCACGAGACAGGCGATGACCGCATTGTCCGTGTGATAAACGATAAACAAAGAACTAGAGGTGATGCTGGCAAGCCACACCACCAAGATGATGCCCACGGCGCGCTGCGTAGTCATGATACTGTGGTACCGGAGTGCGTAAAAGATGGTGATATAACGGTCCGCCGCAATGGTGCACAGAAACGACAAAGAAGACACAACAGAACTACATATCATAATGTCAATAACATTATCTAAGTGCTGCAACATTTTTGCGGTGACCAGCAGTAGCCCATGCTCCGTCAGTAACATAAACAACGTCTCC
ACCACAT/TCCACCACACC TACTGACGCTCACTAGCATGTCTGCCACCGCCAGACAGCAAATAAAATAATACATGGGCGAATGAAGATTCCTGTTCTTGATGATTGCCACAACCACCAAGATGTTTTCTACCAAACTGATCAAACCGAGCATTAGAAAAAGTTCCTGAGGGATCATAATCTGGGCGATCCCTGTGACATTTATGTCGCTGGCTGTTGAGTTGCTGTTTAAAGTGATATTATTGTCAGCATTATACATATAGTCCATGTGTTTCATGCTGAAGTGATGGCGCGAAGAGTCGTTCATGCTCCTTAACTCAGTGTCTGCCCTTCCACAGTCCTTTTGAGCTTGATAGAATTTTCGTTTTCCTTAAGCACACCTTTCATATTAAAAAAAGACAGTTCTGTTTAATTCACCACGATCAGTTCCAGAAAGTCCAACATTTGTTCCCCCCAAACGAATAGGTAATAATAAGAATTCAGCACAAGCAATTTTACCTTTGAAAAAGACTGCTGCGCAC - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| mc1riim17/iim17 (TU) | Homozygous | ♀+/- ♂+/- | 2 figures from Cal et al., 2019 |
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Supplemental Information
- Genotyping protocol
- None
- Fierro-Castro, C., Rotllant, J., Cerdá-Reverter, J.M., Tort, L. (2022) Loss-of-function mutations in melanocortin-1 receptor modulate immune response in teleost fishes. Fish & shellfish immunology. 131:838-846
- Cal, L., Suarez-Bregua, P., Braasch, I., Irion, U., Kelsh, R., Cerdá-Reverter, J.M., Rotllant, J. (2019) Loss-of-function mutations in the melanocortin-1-receptor (Mc1r) cause disruption of dorso-ventral countershading in teleost fish. Pigment cell & melanoma research. 32(6):817-828
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