Genomic Feature

uwm44

ID
ZDB-ALT-201021-1
Name
uwm44
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Huttenlocher Lab
Current Source
Zebrafish International Resource Center (ZIRC)    ( order this )
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 6
Variants
Variant Type
Small Deletion
Variant Location
Chr 6: 47856139 - 47856158 (GRCz11) (1) Details
Nucleotide change
CAGACACGCTGACGCAGGAA/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
20 bp deleted (1)
Transcript Consequence
Premature Stop (1)
Protein Consequence
None
Sequences
Flanking Sequence
ATTCCATCAAATGCTGATTTATTAAGCCTTCTGGACTTATAGTATAAATAAACTGCATAGTTGCAATATAAACAACTACATTTCTGCCTAAAAAAGCCTCAAGTACATTATGTTGATCAACTAATGCAATATTTATCAAACTGTAGTGAGTTGTTTAGTCTCTCTTTAGTCCGAGTGTGGGCGGAGTAATACACAAGGGTCAAGAGGCTGTATGAGTGCTGATATCGCTTTAATATCTTACGGCTATCAGCCAATCAAATCTGAGAACCAGAAAGAAATATTGTATAAATAAAAAAATATCTGATACATGGCACAACCTACGTAATGTGATAGAAACGTTACATTATGTCCACACTCTAAATATAACAAGCAATAAGATAAAATCCTGAACTTAAACATTATAAAGGAAAATCAATACTTTACTCAATAGTTCCTATTTCGTGCATCAGAGTACCAACTCCTGAAGCTGTTCCTGAAGGATTTCCTGATGGTGGTGGGAA
CAGACACGCTGACGCAGGAA/- GTGCCATATTTGGGAGGCAGCAGTGAACTGGAGTTCCATGTAGAAGGTCTTCGTTTCCCTGATAAAGACTTTGATGGACTCGTCACCATCAACCTCAGTCTGCTCGAGCCCTGTGGGAAGGTTAGTCAAATACACTACTGTATGACCCTAAATACAATTAAACTTTCTCTGCTTGCTGGTTTTCTGTTCAAATTACTTTATTATTATTATTATTTTTAAGTTAATTTCATAGTTTTTAAGTTATTTAGAATTGTCCTACAATCTCTTAAAGGAGCACTCCATGTTTTTTAAATAGGTTCATTTTACAACTCGCCTAGATTAAAACAGTTGAGTTTTACCATGAATCCATTCAGCTAATCTCAGTCTAGTAGGAGCATCTTTAGCTTAGCTTAGCATAAATCATTGAATTAGATTAGACCATTAGCATCTTTTTTTAAAATTACTTTTTCTGCCTAGAAACAACTTTTCATTTTCCACGAGTCTCAGTACAAAGTGTAACT
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
padi2uwm44/uwm44Homozygous♀+/- ♂+/-Fig. S2 from Golenberg et al., 2020Fig. 1 from Golenberg et al., 2020
padi2uwm44/uwm44Homozygous♀-/- ♂-/-5 figures from Golenberg et al., 2020Fig. S3 from Golenberg et al., 2020
padi2uwm44/+ (AB)Heterozygous♀+/- ♂+/-
padi2uwm44/uwm44; uwm40TgComplexFig. 2 from Golenberg et al., 2020
padi2uwm44/uwm44; uwm43TgComplexFig. 2 from Golenberg et al., 2020
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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