Genomic Feature
f235jy
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 6: 43903732 - 43903750 (GRCz11) (1) Details
- Nucleotide change
- GCTCCAGAATTATGCCATT/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 19 bp deleted in Exon 1 (1)
- Transcript Consequence
- Premature Stop (1)
- Protein Consequence
- Polypeptide Truncation (1)
- Flanking Sequence
-
TCAGTATCGCCCCGTTCTCCATAAAGACGGACCCACCGTTTGTGTCACCGGAGGTTTCGCCAAAACAAGAACGCAGACAAGACGGCTACGTGCTTCGACGCGATCTCCACAACAAACTGGACGCGTGCGTATAAGCTGTTATTTGTGTTTTGATGAAACGTCTTGGGTTGTTTTCGGCCTACACGACCGCGATTTTCAGATCAATGGAGACGGATACGTGTTTATTAGGGTGCCTTTTCTTCGACATTTCATGGATTACTCAGCAGCTCCATTTTTGAAGAATCAAGAACCGCACGACGCCGAAACGATGCGCGCGATGTCTTGGATCACCAAACGGCTAGAGGTACGGTCATATAAAAAACTCAACTGAGTGTTATCGACTAATATTTTGTTCATCAAACTGGGGGACCAGGACTGCTTAATGTCGGATTACAAAGCCCAGGCTGGGTTGTGCTTGCACAGATGGCGAACACAAGTGATCCAGGGGGAAGCAACCCCTC
GCTCCAGAATTATGCCATT/- ACTGCGTCTGCGGTCAAACTGGCGTCTTTGGGTCTCATCACCTGCATCAGCCTGCTCGGGAATAGCGTGCTGTCCGTGCTGGTGCTGAAAGACAGCTCACTCCACAAGGCTCCATATTACTTCCTCCTCGACCTGTGCGTGGCAGACATCATCCGCTCGGCTGTGTGCTTCCCGTTCGTGATGATCTCCATCAACAGCGGCTCTGTATGGAGCTACAGCTACATCAGCTGCAAGATCATCGCCTTCATGGCCGTCCTGTTCTGCTTCCACATCGCGTTCCTCCTGTTCTGCGTCAGCGTAACGCGCTACATGGCCATCGCGCACCACCGCTTCTACTCCAAACGCATGACGCTGTGGACATGCGTCGCGGTGATATGTATGGTTTGGACGCTCTCGGTCGCGATGGCATTTCCCCCGGTCTTCGATGTCGGGACTTACAAATTCATCCGGGAGGAAGAGCAGTGCATATTCGAGCACAGATACGTGAAAGCCAACGACAC - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| gpr27f235jy/f235jy | Homozygous | ♀+/- ♂+/- | 4 figures from Nath et al., 2020 | 2 figures from Nath et al., 2020 |
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Supplemental Information
- Genotyping protocol
- None
- Rutkove, S.B., Chen, Z.Z., Pandeya, S., Callegari, S., Mourey, T., Nagy, J.A., Nath, A.K. (2023) Surface Electrical Impedance Myography Detects Skeletal Muscle Atrophy in Aged Wildtype Zebrafish and Aged gpr27 Knockout Zebrafish. Biomedicines. 11(7):
- Nath, A.K., Ma, J., Chen, Z.Z., Li, Z., Vitery, M.D.C., Kelley, M.L., Peterson, R.T., Gerszten, R.E., Yeh, J.J. (2020) Genetic deletion of gpr27 alters acylcarnitine metabolism, insulin sensitivity, and glucose homeostasis in zebrafish. FASEB journal : official publication of the Federation of American Societies for Experimental Biology. 34:1546-1557
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