Genomic Feature

zf2220

ID
ZDB-ALT-200311-4
Name
zf2220
Synonyms
  • slbp2?4 (1)
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with CRISPR
Lab of Origin
Gui Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 21
Variants
Variant Type
Small Deletion
Variant Location
Chr 21: 30291553 - 30291556 (GRCz11) (1) Details
Nucleotide change
CCGG/-
Variant Notes
The mutation altered altered the RBD domain.
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
4 bp deleted in Exon 6 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
AAATTCAAATTAGGAGTTAATTTAAATTAAATATACATGTTAATATGGTAACATGAGCGGCACTCAGGTAAGAGTGGTTAAGCCCAGAGGGGTGGGGAAAATGTTTATAATTCCTGGATTACATTAACAAACAATCAAAAACATGAAAAAGAGATAACATAAGAATTTTCCCAATTCTTTCTCTTTTTTCTGAGAATTAATAATTGGTGAAGGCCACCAATTACAAAAATTGCAATAAATGACATGCAATCTTACTATTTGAATTCCATGATAATGGAGTATATTACAAATGTGATCCAATTACAAGTGGATCATATTCGTGATCAGATTATGTAGTTAAATTTACTACCAGGTTGAGAATGAGCCAGCGTTTACCATTTCATGTGTGAAAAGCTCTATTCAGCCTATAAAACTTACAGTTGATCAACAGGGTCTTGTCCTTCAGTATCATTTTGCGATGCAGATGGCAGGTCCCAAGCATGAAGTGCTCTCCTCCAAAG
CCGG/- ACTTGCATGTCCCAAGATCTGCGGCTATATTTGCGGTATTTGTTTGGAGTGGAAGGATGAATTCCAGGGACACGCAGACGCCTGAACAGAGGAGACAGAAGCCAGAAAGATTAGTTACGCTCTTAATACAATCAGAAGGGCATCCAAGAAGAAAAGTGAACACTAGCAGCTAATAGTTGGATATTTACGTTCACCACAACTCACTTCGGAACCTGCTGAACGTAGTTCTGGTAGCCACAGGTATTCTTCCCATACTGAATCTGCTTTTGCCTACGCTTCAAAACAGCCTCATTGATCTCAAAATGAGAAGGGTCAGCATTATGGGGATACCACTTTCCCCTTGATGGTGACCTACAAAATCAGTAAAACAATACTTGCATTATATGAAATAATTTAAACTAATATTAATAAACACTTAAATGCTTTAAGTTGAGGAACATGCCTAAAAAAAAAAAACTTAGAGCTTCATCTTTAAAAACCACACACACACACAGAACATT
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
slbp2zf2220/zf2220Homozygous♀-/- ♂-/-2 figures from He et al., 20182 figures from He et al., 2018
slbp2zf2220/zf2220Homozygous♀+/- ♂+/-Fig. 3 from He et al., 2018Fig. 5 from He et al., 2018
slbp2zf2220/+Heterozygous♀-/- ♂+/+Fig. 3 from He et al., 2018
slbp2zf2220/zf2220; zf2217TgComplexFig. 4 from He et al., 2018
slbp2zf2220/zf2220; zf2218TgComplexFig. 4 from He et al., 2018
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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