Genomic Feature
hm38
- ID
- ZDB-ALT-200304-33
- Name
- hm38
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one delins (1)
- Protocol
- embryos treated with
- Lab of Origin
- Megason Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Delins
- Variant Location
- Chr 19: 30876619 - 30876645 (GRCz11) (1) Details
- Nucleotide change
- CACGTGCCCTACTCTGCTCTCACCATG/ATCAGTGC
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 8 bp inserted / 27 bp deleted (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
TTCAGCGTCCGCATTAGCCACCTAGGAGTCGTGCAGGTTTATGAACAAAGACAGGAAGTGATCCAGTCAATTTGCTTGTGACTCAATTTGTTGGGAAACTTATGATGACGTCTTGGCTTTTATAATAAAAAAGGGAAAGGATATGACATGCCTGGCACATGATGTGCTGTAAAACTTCACTTAGCACACCTCAACTATGTATGTTATCTGTTTCCCAAACATGCTAATCATCATGATTATCGTTTATACCATTCCACTAATGCCATCTCTTTTACTTTATGCAGGATTGTTTTGTCTACTCCATTTGCTGTACTTTGCTATTTCCTCATCTGGTACGTGCCCTCTGTTGACCAAGGGAAAGTTGTCTGGTATCTAATCTTCTACTGCTGCTTCCAAACATTACAGACAGTGAGTAATCTTATTTATGACATTATAAGTTGTTTCTTATTTGGCTTTGAGAACATTTCCTAACCTTTCTGTTTCTTAAAAAACAGTGCTTC
CACGTGCCCTACTCTGCTCTCACCATG/ATCAGTGC TTCATCAGCACTGAACAGAAAGAGAGGGATTCGGCTACAGCTTACCGTGAGTTTTAAAGCATCTACAGCTAGTTGTGTTCTCTGTGACCGCTAGTTGTGTTTGCATGGCTAACCTTTTATCTCTTACCACAGGAATGACTGTTGAGGTTTTGGGCACACTCATAGGCACTGCTATTCAGGGTCAGATTGTGGGAATGGCCAATGCTCCCTGTATCAGCACTGAGATTGACCTGAACTCCACGGGTTTGGAGGTGGCTCCTGACGTCAACATCACTGACCCTCATGTTTCACTGCAGGACCTGGTAAGGCTTTTTTAAAGACAGGCTGTTAAAATTAATGTTTGTTTTTGTAATTTTTATTAAATGGTTTGTATCTTATGGGTTCCACAGAGAAATGCTTACATGATTGCATCTGGTGTCATCTGCGCGATCTATGTTGTCTGTGCTGTGGTCCTGTTCCTTGGTGTGAAAGAACAAAAGGGTAAGTGCTGATACTATTAC - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| mfsd2abhm38/hm38 | Homozygous | ♀+/- ♂+/- | Figure 5-figure supplement 3.  from O'Brown et al., 2019 | ||
| mfsd2abhm38; lri500Tg; s896Tg | Complex | Figure 5-figure supplement 1. from O'Brown et al., 2019 | |||
| mfsd2aahm37/hm37; mfsd2abhm38/hm38 | Complex | Figure 5-figure supplement 3. from O'Brown et al., 2019 |
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Supplemental Information
- Genotyping protocol
- None