Genomic Feature

hm37

ID
ZDB-ALT-200304-32
Name
hm37
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Megason Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 13
Variants
Variant Type
Small Deletion
Variant Location
Chr 13: 35931099 - 35931105 (GRCz11) (1) Details
Nucleotide change
GCGATCG/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
7 bp deleted (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
CTCTTAAAAAAGTAGTATCAAACATGATCAATCTTTAACCATATCAGCGTTAATCAATTAATACCCAATTTTCTTATCACTATTTTTTAGCATGAAAATAAAATAAATTATTGACCAATAAATTTTGGATTATTTCCAACTGTTGACTACAAGAGTTTCGTGAGGATCTTAATTCTACTGGACTGAATCTCAGAGAGCCCTCCGGCAGTTCTGAATGCTCTTTTATGCTGTGCGCTGGGATGTTTGTGGGGGAAAAGAGCTTCAGAAGGAACGTCCGAAAAACATGAACGCTGTCCAAACTAAATCACCTCTTCCAGTGAGGATTTTATCATGGTCTCTTGCGGTGGAAAGTTCATCAGTCTCTCATGACTCTTCCCTTACTCGCCACAATCACTGTCATTGTTTGTCCTTTCATAATCTCTCCTTTTTTGTCCTCTTTTCAGCTCTCAAAGCAGCAGGAGAGGAAAAGAGCGCTGACTGTGTGGAGTAAGGTGTGTTTT
GCGATCG/- GAGGGGCTCCGTATCAGATCACAGGCACCGCCCTGGGCTTCTTTCTACAAATCTTCTTGCTTGATGTGGCACGGGTGAGTATACGTATGGGAATGATGGAACTTAATGCATCTATACTGTGTAAGACCTGAGCACCTTCTGCTTGTGAAAATAAACTGGCTCAGCATCGTTTTGTTACTATATCATATCATTCCATATGACTAGATAGAATTATTTCAAACAAAAGCTAGTACATAATGAACCAGAGTCCGCAGGTCAGGTGCAAGATAGTGGAAAAGAAAAGAGTGAAATAGTAGGTATGAAGCCTCCTTTAGTGCATCTGTGTGACTATCAATCCCCAGCTCCAGTTATCTTATTTAAAACTCATTAAAGTGGCAGTTTCCATAGCAATAGTCAATCAGAGATTCTTATCTGAGTTGGTGAAGCAAATGAAGTATTGGCATCAGGTACGGTTAAGGAACTGTCAATTTACTCATTTGAACGGTACTCTTCACAATATC
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
mfsd2aahm37/hm37Homozygous♀+/- ♂+/-3 figures with image from O'Brown et al., 2019
mfsd2aahm37/hm37; s896TgComplex2 figures with image from O'Brown et al., 2019
mfsd2aahm37/+; s896TgComplexFigure 6 with image from O'Brown et al., 2019
mfsd2aahm37/hm37; mfsd2abhm38/hm38ComplexFigure 5-figure supplement 3. with image from O'Brown et al., 2019
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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