Genomic Feature

nub31

ID
ZDB-ALT-200302-2
Name
nub31
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Hibi Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Genome Build: GRCz11Chromosome: 23
Variants
Variant Type
Small Deletion
Variant Location
Chr 23: 16638929 - 16638932 (GRCz11) (1) Details
Nucleotide change
CAAC/-
Variant Notes
Mutant protein is truncated upstream of the microtubule-binding
domain (MTB).
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
4 bp deleted (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
GACAAACTGCAGCATTTGCAGTTTCCACACCCTCTGGCCTACAGAGATTTAATACTAATTACAGAGCCGTGCTTCCCTTACAAGATGTGCATGACAATCACTGCTTTTTCTAAATTATACTCGATTTCATTTCGATGTATCATGCAGCCCTAATCCTGTGTCCTACTAAGTGGCTTTGAAGGTGACGCTGTGAAATTGTGATTTTTGTTATGGAACAGACGGAGTCCAGCACCTGTCAGTAACCGTGATCCCTATGGAAATGCCTCTCTCAGCAGCAGTAGCAATTCAGGGTCATGCAAGGGCAGTGATGGAAGCCCAACCCATAGGTGAGACACAACTTGTCTAGTGATGTCACTTTTTTATGCATCTATTTAAATATTATGTTTTTTTCTTCTATATACCAATTTTTTGTCTATGTCAGGCGTCACATAAAATACACCTCCTGCAATGATAACCATGGCATTCGACCTCCTCCTCCTGAGCAATACCTCACCCCACTG
CAAC/- AGAAAGAGGTGTGCATCAGGCACCTGAGAGCACGGCTTAAAGAGACCATCGAAAGACTGCAGGACAGGTGAGGCATCCATCGAAATCACCGTAAGGGTCCATGCAGGATTTAATTAGTCTGATGAAATTGGTTTTAGATTTTTTAACAGCTAAAGCAAGTAGCGGTTAATTAAAGGGGCTACTTTATTTCTATGCAAATGTTCACTTGGTTTATTTTCATGTCCATGTAAAAAAATGTAAAAACAGATTTGCCTATTAAATTGCTTCACAGTGAATACTACCATTAAACTGCAGTCTCGTTTATTTCTCTCATCAGCACAGGCTATTTATTACGTCTAAACTGTTTATTTAATGGCAGCCTCCATTTGTCTAATGGCAAGGATCACATAAGCATAAATGTATTTTCAAAGCTTCTGTGTGTAATGCTCCAAAGAGAGATATTGTTGAACATTCCTATTCATCAAACAATCCAGCCATTGTTTGGCTGGATAATGATTTGC
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
snphanub30/nub30; snphbnub31/nub31Complex2 figures from Verreet et al., 2019
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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